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The map label for this gene is ybeB [H]

Identifier: 238920814

GI number: 238920814

Start: 2828723

End: 2829040

Strand: Direct

Name: ybeB [H]

Synonym: NT01EI_2940

Alternate gene names: 238920814

Gene position: 2828723-2829040 (Clockwise)

Preceding gene: 238920813

Following gene: 238920815

Centisome position: 74.2

GC content: 55.35

Gene sequence:

>318_bases
TTGCAAGGTAAAGCACTCCAAGATTTCGTTATTGATAAGATCGATGATCTGAAGGGCCAGGATATCGCCGCCATCGACGT
CTGCGGCAAATCCAGTATTACTGACTGTATGATCATCTGCACCGGCACCTCCAGCCGCCATGTGATCTCCATTGCCGACC
ACGTGGTACAGTCGTCTCGCGCCGCCGGCCTACTGCCACTGGGGGTAGAGGGTCAGAACGGCGCCGAATGGGTGGTGGTC
GATCTCGGCGATGTTATCGTACACGTGATGCAGGAAGAGAGCCGCCGTCTGTACGAACTGGAAAAGTTGTGGAGCTGA

Upstream 100 bases:

>100_bases
TCTCGCTCCGCCCACCTGCGCCCCCTGCGGAACGCATATGGTGGCGAGTAATGCTTGATATGACAGCATAAATTTAAGAC
CTATTGATTAGGGGGAACCT

Downstream 100 bases:

>100_bases
TGCGGTGAAACTGCAGCTGGTGGCGGTCGGCACCAAAATGCCCGACTGGGTACAAACCGGTTTTCTCGACTATATTAAGC
GTTTTCCCAAGGATATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQGKALQDFVIDKIDDLKGQDIAAIDVCGKSSITDCMIICTGTSSRHVISIADHVVQSSRAAGLLPLGVEGQNGAEWVVV
DLGDVIVHVMQEESRRLYELEKLWS

Sequences:

>Translated_105_residues
MQGKALQDFVIDKIDDLKGQDIAAIDVCGKSSITDCMIICTGTSSRHVISIADHVVQSSRAAGLLPLGVEGQNGAEWVVV
DLGDVIVHVMQEESRRLYELEKLWS
>Mature_105_residues
MQGKALQDFVIDKIDDLKGQDIAAIDVCGKSSITDCMIICTGTSSRHVISIADHVVQSSRAAGLLPLGVEGQNGAEWVVV
DLGDVIVHVMQEESRRLYELEKLWS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=32.6732673267327, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=91.4285714285714, Blast_Score=196, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 11424; Mature: 11424

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKALQDFVIDKIDDLKGQDIAAIDVCGKSSITDCMIICTGTSSRHVISIADHVVQSSR
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCC
AAGLLPLGVEGQNGAEWVVVDLGDVIVHVMQEESRRLYELEKLWS
CCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGKALQDFVIDKIDDLKGQDIAAIDVCGKSSITDCMIICTGTSSRHVISIADHVVQSSR
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEHHHHHHHHCCC
AAGLLPLGVEGQNGAEWVVVDLGDVIVHVMQEESRRLYELEKLWS
CCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]