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The map label for this gene is lptE [H]

Identifier: 238920811

GI number: 238920811

Start: 2826195

End: 2826869

Strand: Direct

Name: lptE [H]

Synonym: NT01EI_2937

Alternate gene names: 238920811

Gene position: 2826195-2826869 (Clockwise)

Preceding gene: 238920810

Following gene: 238920812

Centisome position: 74.13

GC content: 63.41

Gene sequence:

>675_bases
GTGCAACACCGTATTACTGCGCTGTTGCTGGGATTGGCGGTGCTGGTCACCGCCGGATGCGGATTCCACCTGCGCGGCAG
CGCGCAGGTTCCCAGCGAGTTTCATAAGCTGATCCTGGACAGCAACGACCCGTATGGCCCCTTCACCCGTGCGGTGCGCG
AGCAGCTGCGCCTGAGCAACGTCATCATCGTCGATGCGCAGAGCCAGCCGCTGCAGAGCAGTATCGCCAAAGCGGACGCG
GACAAGACGGCCACGCCGCTGCCCTCCCTGCGGCTGCTCGGCGTCAGCCAGAGCCAGGACACCGTCTCCATCTTTAAGGA
CGGGGTCACCGCGGAGTACCAGATGGTGATGACCGTCAACGCCCAGGTGCTGGTGCGCGGCCACGACCTCTACCCTCTGA
CGGTGCGCATCTACCGCAGCTTCTTCGACAACCCGCTGGCCGCACTGGCCAAGGATGCCGAACAGGCGATGCTGGTACAG
GAGATGTACCAACAGGCGGCGCAGCAACTGGTGCGTAAGCTGATGAGCGTTCAGGCCGCTGAACTGCAAAACAACGACCG
CCGCATGAGCAGCGACGTCAGCGCACCCAGGGTTCAGGGCAGCAACGACTTTGAACGGGTCAACACCGGCGTTATCGCTA
CGCCGGCCGCACAGGCCGGACAGCAGGAAAAATGA

Upstream 100 bases:

>100_bases
CGCTGGTCGCCAAGTACCTCGACGGAGTCACCGTACGCAAGGTGATCTTTGTGCCGGGCAAACTGCTCAACCTGGTTGTC
GGGTGAGCCTAGGAGGACGT

Downstream 100 bases:

>100_bases
GCCGGATTTACCCCGAACAGCTCGGCGCACAGCTGCAGGACGGGTTGCGCGCCTGCTACTTCATTCTGGGAAACGAGCCG
CTGCTGATCCAGGAGAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQHRITALLLGLAVLVTAGCGFHLRGSAQVPSEFHKLILDSNDPYGPFTRAVREQLRLSNVIIVDAQSQPLQSSIAKADA
DKTATPLPSLRLLGVSQSQDTVSIFKDGVTAEYQMVMTVNAQVLVRGHDLYPLTVRIYRSFFDNPLAALAKDAEQAMLVQ
EMYQQAAQQLVRKLMSVQAAELQNNDRRMSSDVSAPRVQGSNDFERVNTGVIATPAAQAGQQEK

Sequences:

>Translated_224_residues
MQHRITALLLGLAVLVTAGCGFHLRGSAQVPSEFHKLILDSNDPYGPFTRAVREQLRLSNVIIVDAQSQPLQSSIAKADA
DKTATPLPSLRLLGVSQSQDTVSIFKDGVTAEYQMVMTVNAQVLVRGHDLYPLTVRIYRSFFDNPLAALAKDAEQAMLVQ
EMYQQAAQQLVRKLMSVQAAELQNNDRRMSSDVSAPRVQGSNDFERVNTGVIATPAAQAGQQEK
>Mature_224_residues
MQHRITALLLGLAVLVTAGCGFHLRGSAQVPSEFHKLILDSNDPYGPFTRAVREQLRLSNVIIVDAQSQPLQSSIAKADA
DKTATPLPSLRLLGVSQSQDTVSIFKDGVTAEYQMVMTVNAQVLVRGHDLYPLTVRIYRSFFDNPLAALAKDAEQAMLVQ
EMYQQAAQQLVRKLMSVQAAELQNNDRRMSSDVSAPRVQGSNDFERVNTGVIATPAAQAGQQEK

Specific function: Together with lptD, is involved in the assembly of LPS in the outer leaflet of the outer membrane [H]

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptE lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786860, Length=182, Percent_Identity=52.7472527472528, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007485 [H]

Pfam domain/function: PF04390 RplB [H]

EC number: NA

Molecular weight: Translated: 24521; Mature: 24521

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHRITALLLGLAVLVTAGCGFHLRGSAQVPSEFHKLILDSNDPYGPFTRAVREQLRLSN
CCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
VIIVDAQSQPLQSSIAKADADKTATPLPSLRLLGVSQSQDTVSIFKDGVTAEYQMVMTVN
EEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEEC
AQVLVRGHDLYPLTVRIYRSFFDNPLAALAKDAEQAMLVQEMYQQAAQQLVRKLMSVQAA
EEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELQNNDRRMSSDVSAPRVQGSNDFERVNTGVIATPAAQAGQQEK
HHHCCCHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MQHRITALLLGLAVLVTAGCGFHLRGSAQVPSEFHKLILDSNDPYGPFTRAVREQLRLSN
CCHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
VIIVDAQSQPLQSSIAKADADKTATPLPSLRLLGVSQSQDTVSIFKDGVTAEYQMVMTVN
EEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEEC
AQVLVRGHDLYPLTVRIYRSFFDNPLAALAKDAEQAMLVQEMYQQAAQQLVRKLMSVQAA
EEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELQNNDRRMSSDVSAPRVQGSNDFERVNTGVIATPAAQAGQQEK
HHHCCCHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA