Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
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Accession | NC_012778 |
Length | 2,144,190 |
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The map label for this gene is regX3 [H]
Identifier: 238917552
GI number: 238917552
Start: 1689427
End: 1690095
Strand: Reverse
Name: regX3 [H]
Synonym: EUBELI_01631
Alternate gene names: 238917552
Gene position: 1690095-1689427 (Counterclockwise)
Preceding gene: 238917553
Following gene: 238917551
Centisome position: 78.82
GC content: 38.42
Gene sequence:
>669_bases ATGGCTCTTATATACATAGTTGAGGATGATGAAAGCATAAGGGAAATAGAGACAATTGCACTTAAGAACAGTGGACATAT GGTAGGTGCATTTGGAAGTTCCAAAGAGTTTTTTAAGAAGCTTGATGAGATTCTTCCGGACCTTGTGTTGCTTGATGTTA TGCTTCCTGATGAAAGTGGTTATGACATCATTAAGAAGTTAAGACTGAATTCTGCAACTAAGAGACTGCCGGTTATTATG GTGACGGCAAAGTCTACAGAGCTTGATATGATAAAGGGACTTGAGGATGGTGCTGACGATTATATTAAGAAGCCGTTTTC TGTAATGGAGCTTATTACAAGAGTTAAAGCACTTCTTAGAAGAACAGAAACAGACGAGGCAGGCGTGCTTGATGTAGGAG AGATTGAACTTAATCATGAAAGGCATGTGGTTACGGTCTCAGGAAAGCAGGTTGAACTTACATTTAAAGAATATGAATTG TTAAGATATCTTATGGCTAACAAGAATATAGTGCTTTCAAGAGATTCTATTGTACTTAAGGTATGGGGAACAGAGTTTGA AGGTGAGTCAAGAACTGTGGATATGCATATTAAGACTTTAAGACAGAAGTTGGGTGATGCAGGCTCGCGTATAAGAACCG TGCGTAATGTAGGATATGTTATAGAGTAG
Upstream 100 bases:
>100_bases AATGAGGATAATCCTCAGTTTGCAAAAGAATGCAGACAGTATTATAAACAGTATCAGCTTCCGGAATTAAAGAAAGCTGA CTAGAACAGGAGATGAGAAT
Downstream 100 bases:
>100_bases CCTGATATAATTAACAGACAGAACAGGGTGGATATATGAAGCAGAAGATTAATTTAAGGCTTATTGGAATAGCAGTTATA GCAGTTCTTGCTACAGCTAT
Product: two-component system OmpR family phosphate regulon response regulator PhoB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MALIYIVEDDESIREIETIALKNSGHMVGAFGSSKEFFKKLDEILPDLVLLDVMLPDESGYDIIKKLRLNSATKRLPVIM VTAKSTELDMIKGLEDGADDYIKKPFSVMELITRVKALLRRTETDEAGVLDVGEIELNHERHVVTVSGKQVELTFKEYEL LRYLMANKNIVLSRDSIVLKVWGTEFEGESRTVDMHIKTLRQKLGDAGSRIRTVRNVGYVIE
Sequences:
>Translated_222_residues MALIYIVEDDESIREIETIALKNSGHMVGAFGSSKEFFKKLDEILPDLVLLDVMLPDESGYDIIKKLRLNSATKRLPVIM VTAKSTELDMIKGLEDGADDYIKKPFSVMELITRVKALLRRTETDEAGVLDVGEIELNHERHVVTVSGKQVELTFKEYEL LRYLMANKNIVLSRDSIVLKVWGTEFEGESRTVDMHIKTLRQKLGDAGSRIRTVRNVGYVIE >Mature_221_residues ALIYIVEDDESIREIETIALKNSGHMVGAFGSSKEFFKKLDEILPDLVLLDVMLPDESGYDIIKKLRLNSATKRLPVIMV TAKSTELDMIKGLEDGADDYIKKPFSVMELITRVKALLRRTETDEAGVLDVGEIELNHERHVVTVSGKQVELTFKEYELL RYLMANKNIVLSRDSIVLKVWGTEFEGESRTVDMHIKTLRQKLGDAGSRIRTVRNVGYVIE
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=219, Percent_Identity=39.2694063926941, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=37.3873873873874, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=37.1559633027523, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=36.283185840708, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=31.2217194570136, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=32.2727272727273, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=34.8623853211009, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=34.6491228070175, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI2367329, Length=180, Percent_Identity=38.3333333333333, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=35.2678571428571, Blast_Score=113, Evalue=8e-27, Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=33.0357142857143, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1787229, Length=210, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI145693140, Length=192, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=29.2576419213974, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=30.4347826086957, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25187; Mature: 25055
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIYIVEDDESIREIETIALKNSGHMVGAFGSSKEFFKKLDEILPDLVLLDVMLPDESG CEEEEEEECCCHHHHHHHEEEECCCCEEEECCCCHHHHHHHHHHCCHHEEEEEECCCCCC YDIIKKLRLNSATKRLPVIMVTAKSTELDMIKGLEDGADDYIKKPFSVMELITRVKALLR HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHH RTETDEAGVLDVGEIELNHERHVVTVSGKQVELTFKEYELLRYLMANKNIVLSRDSIVLK HCCCCCCCCEEECEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHCCCEEEECCCEEEE VWGTEFEGESRTVDMHIKTLRQKLGDAGSRIRTVRNVGYVIE EECCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCEEC >Mature Secondary Structure ALIYIVEDDESIREIETIALKNSGHMVGAFGSSKEFFKKLDEILPDLVLLDVMLPDESG EEEEEEECCCHHHHHHHEEEECCCCEEEECCCCHHHHHHHHHHCCHHEEEEEECCCCCC YDIIKKLRLNSATKRLPVIMVTAKSTELDMIKGLEDGADDYIKKPFSVMELITRVKALLR HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHH RTETDEAGVLDVGEIELNHERHVVTVSGKQVELTFKEYELLRYLMANKNIVLSRDSIVLK HCCCCCCCCEEECEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHCCCEEEECCCEEEE VWGTEFEGESRTVDMHIKTLRQKLGDAGSRIRTVRNVGYVIE EECCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA