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The map label for this gene is spoIIAB [H]

Identifier: 238917529

GI number: 238917529

Start: 1662255

End: 1662680

Strand: Reverse

Name: spoIIAB [H]

Synonym: EUBELI_01608

Alternate gene names: 238917529

Gene position: 1662680-1662255 (Counterclockwise)

Preceding gene: 238917530

Following gene: 238917528

Centisome position: 77.54

GC content: 40.14

Gene sequence:

>426_bases
ATGATAGAGAATAACAATGTTGAATTATTATTTGAAGCAAAATCAGAAAATGAAGCATTTGCAAGGGTTGTGGCGGCAGC
CTTTGTTACATACTTAGATCCTACAATGGAAGAATTGCAGGACATAAAAACAGCAGTTTCCGAGGCAGTAACCAATGCAA
TAGTCCACGGCTATGATAATGGTCCGGGAAAGGTGAGAATGAGACTTAAAGGCATACAGAATCAGGTAATAATAGAAGTA
CATGATGATGGTCTTGGCATGGAAAATGTTGCAAAAGCAATGGAACCTCTGTATACAACCAAGCCTGAACAGGAACGTTC
AGGAATGGGATTTTCGTTCATGGAGGCATTCATGGATGATTTAAGAGTTGCGTCAGCACCAGGCAAAGGAACAACAGTGC
TTATGAGAAAGAAAATAGGGGAGTAA

Upstream 100 bases:

>100_bases
CAATCGTTGGAGTCCGTGAAAGTGTTAAGAGGATACTTCTTATATCAGGACTTCATAAGATAGTTAATATATATGAACTT
AAAGGACAGGAGGTATAAGC

Downstream 100 bases:

>100_bases
TTGATAGGATGTGATGCTATGGATCAGACTAAGGATTGTACCAGGGAATTGATCGCTAAAGCACACAATAATGACAAAGA
GGCCAGAGAGAAGCTGGTAA

Product: stage II sporulation protein AB (anti-sigma F factor)

Products: NA

Alternate protein names: Stage II sporulation protein AB [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIENNNVELLFEAKSENEAFARVVAAAFVTYLDPTMEELQDIKTAVSEAVTNAIVHGYDNGPGKVRMRLKGIQNQVIIEV
HDDGLGMENVAKAMEPLYTTKPEQERSGMGFSFMEAFMDDLRVASAPGKGTTVLMRKKIGE

Sequences:

>Translated_141_residues
MIENNNVELLFEAKSENEAFARVVAAAFVTYLDPTMEELQDIKTAVSEAVTNAIVHGYDNGPGKVRMRLKGIQNQVIIEV
HDDGLGMENVAKAMEPLYTTKPEQERSGMGFSFMEAFMDDLRVASAPGKGTTVLMRKKIGE
>Mature_141_residues
MIENNNVELLFEAKSENEAFARVVAAAFVTYLDPTMEELQDIKTAVSEAVTNAIVHGYDNGPGKVRMRLKGIQNQVIIEV
HDDGLGMENVAKAMEPLYTTKPEQERSGMGFSFMEAFMDDLRVASAPGKGTTVLMRKKIGE

Specific function: Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases si

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anti-sigma-factor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010194
- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 15556; Mature: 15556

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENNNVELLFEAKSENEAFARVVAAAFVTYLDPTMEELQDIKTAVSEAVTNAIVHGYDN
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPGKVRMRLKGIQNQVIIEVHDDGLGMENVAKAMEPLYTTKPEQERSGMGFSFMEAFMDD
CCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH
LRVASAPGKGTTVLMRKKIGE
HHHCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MIENNNVELLFEAKSENEAFARVVAAAFVTYLDPTMEELQDIKTAVSEAVTNAIVHGYDN
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPGKVRMRLKGIQNQVIIEVHDDGLGMENVAKAMEPLYTTKPEQERSGMGFSFMEAFMDD
CCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHH
LRVASAPGKGTTVLMRKKIGE
HHHCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]