Click here to switch to the map view.

The map label for this gene is spoVAA [H]

Identifier: 238917527

GI number: 238917527

Start: 1660852

End: 1661508

Strand: Reverse

Name: spoVAA [H]

Synonym: EUBELI_01606

Alternate gene names: 238917527

Gene position: 1661508-1660852 (Counterclockwise)

Preceding gene: 238917528

Following gene: 238917526

Centisome position: 77.49

GC content: 38.81

Gene sequence:

>657_bases
ATGAATAAATTTTTGGGTATGTACAATACTAATACTAGCAACGGAGGGTTTGTTATGTCAGAGAAGATTTATTTGAAGAT
TGACCAGCAAAGGTATGTTAAGAAGCCTAGGGTCACTATTGGGGATGTGATGACTGTTTATTGCAGTGATAAGGATATGA
TTGAAAAAATCGGACATATAACGCTTGCGGAGTTTACGCTGGGCAAGTACGACAGGAAGGTGTTTGACGCACTTGATGTT
GTGGGGATTATTCAGAAGGAGTATCCGGATGCAGATATTGAATGTCTTGGGGAATGTGATTTTGTTGTTGAGTACAAGAA
GCCGGAGAAGGAAGGCACAGTGCATTGGATTAAGGTAGCTGTTATATGTTTTATAACAATGGTTGGAAGCGGATATGGAA
TTATTGCGTACAACAATGACGTAAGTACGACGGATATATTTGACCGGGTGTACGAGCTTCTTGGAGCTTCTGCATATAAG
GCAACAAATGCAATGGAGATTGCCTATGCTGTGGGATTGTTTATTGGAATTGTTATATTTTATGATCATTTTGCAGGACA
AAAGCTGTCAAAAGCACCAACACCGCTTGAGATTGAAATGGATAAATATGACAAAGATATATCAGAATCTGTTATTGATA
GGGAAGGTGGAAAATGA

Upstream 100 bases:

>100_bases
ACACACAGATGCAGGTTGCTAAGGAGTTCGGAATATCGCAGGTGCAGGTGTCGCGGATGGAGAAGAAGATTTTAAGTGGC
ATGCGCAAGCGGCTGGTTGT

Downstream 100 bases:

>100_bases
TAGCGGTTATTATTCTTATAGGGGCTATGTCGGGAGTGTTTACTGCAGCAGGACTTTTTGCACTTATAACCAGTGTTGGT
GTTATTAACAGATATGCTGA

Product: stage V sporulation protein AA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNKFLGMYNTNTSNGGFVMSEKIYLKIDQQRYVKKPRVTIGDVMTVYCSDKDMIEKIGHITLAEFTLGKYDRKVFDALDV
VGIIQKEYPDADIECLGECDFVVEYKKPEKEGTVHWIKVAVICFITMVGSGYGIIAYNNDVSTTDIFDRVYELLGASAYK
ATNAMEIAYAVGLFIGIVIFYDHFAGQKLSKAPTPLEIEMDKYDKDISESVIDREGGK

Sequences:

>Translated_218_residues
MNKFLGMYNTNTSNGGFVMSEKIYLKIDQQRYVKKPRVTIGDVMTVYCSDKDMIEKIGHITLAEFTLGKYDRKVFDALDV
VGIIQKEYPDADIECLGECDFVVEYKKPEKEGTVHWIKVAVICFITMVGSGYGIIAYNNDVSTTDIFDRVYELLGASAYK
ATNAMEIAYAVGLFIGIVIFYDHFAGQKLSKAPTPLEIEMDKYDKDISESVIDREGGK
>Mature_218_residues
MNKFLGMYNTNTSNGGFVMSEKIYLKIDQQRYVKKPRVTIGDVMTVYCSDKDMIEKIGHITLAEFTLGKYDRKVFDALDV
VGIIQKEYPDADIECLGECDFVVEYKKPEKEGTVHWIKVAVICFITMVGSGYGIIAYNNDVSTTDIFDRVYELLGASAYK
ATNAMEIAYAVGLFIGIVIFYDHFAGQKLSKAPTPLEIEMDKYDKDISESVIDREGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021997 [H]

Pfam domain/function: PF12164 SporV_AA [H]

EC number: NA

Molecular weight: Translated: 24550; Mature: 24550

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLGMYNTNTSNGGFVMSEKIYLKIDQQRYVKKPRVTIGDVMTVYCSDKDMIEKIGHI
CCCCEEEECCCCCCCCEEEECEEEEEECHHHHHCCCCCEECCEEEEEECCHHHHHHHCCE
TLAEFTLGKYDRKVFDALDVVGIIQKEYPDADIECLGECDFVVEYKKPEKEGTVHWIKVA
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHH
VICFITMVGSGYGIIAYNNDVSTTDIFDRVYELLGASAYKATNAMEIAYAVGLFIGIVIF
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YDHFAGQKLSKAPTPLEIEMDKYDKDISESVIDREGGK
HHHHCCCHHHCCCCCEEEEHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MNKFLGMYNTNTSNGGFVMSEKIYLKIDQQRYVKKPRVTIGDVMTVYCSDKDMIEKIGHI
CCCCEEEECCCCCCCCEEEECEEEEEECHHHHHCCCCCEECCEEEEEECCHHHHHHHCCE
TLAEFTLGKYDRKVFDALDVVGIIQKEYPDADIECLGECDFVVEYKKPEKEGTVHWIKVA
EEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCHHHHHHH
VICFITMVGSGYGIIAYNNDVSTTDIFDRVYELLGASAYKATNAMEIAYAVGLFIGIVIF
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YDHFAGQKLSKAPTPLEIEMDKYDKDISESVIDREGGK
HHHHCCCHHHCCCCCEEEEHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]