Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
---|---|
Accession | NC_012778 |
Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is 238917478
Identifier: 238917478
GI number: 238917478
Start: 1606416
End: 1607477
Strand: Reverse
Name: 238917478
Synonym: EUBELI_01556
Alternate gene names: NA
Gene position: 1607477-1606416 (Counterclockwise)
Preceding gene: 238917479
Following gene: 238917477
Centisome position: 74.97
GC content: 39.64
Gene sequence:
>1062_bases ATGACATTTTATCAGGAGTTACAGTTAAGCTCGGCTGGTTCAAAACAGCTTATCAAGAACACACAGGATTCTAAAGAGAA AAGAAGACATATTCTTATATATAATTTTAAGGTGTATCTTGTTATGATATTCTGCGTCGCAGTAGTTACAGTATTCAGTA AGCTGCTGGGGAATAATAACAGCGTTGTCGGAGTGACAGTGCTTCTTGCGGTGCTGGTATTAAGACAGGCGGATTTTGGA ATTAAGACATCACATGGTTTAGTTTCGATAATGGGAATATATGCAATATTGATAGCAGGACCGAGGGTTTCTAATATGGT ACCGCCAGTTGCTGCATTTGTAATAAATGTTGTGTGTATTATGCTTCTTATGATAATGGGATGTCACAATGTAATTATGT ATAATCATTCAACATTCGTTCTTGGGTATCTTTTGCTGCAGGGATATGATGTCACAGGCCATGAATATATAATGAGAGTT GTGGGACTGCTTGCCGGGATGTTAGTATGCATGATTATTTTCTATAAGAATCAGAGGAACAGACCATATAGAAGAACATT CTGGGACTTGTTTAAGGAATTTAATATTAATTCAGCAAGGACAAGATGGTACATTAAGCTTACATTTATCGTATCAAGCG CTATGCTGATTGTTTCCCTGATGGGACTGCCTAGGGCAATGTGGATTGGAATTGCGTGCATGTCAGTGTGTCTGCCGTTT TCTAAAGATGTTGATAAGAGAATTGGAAACAGGGCATTGTTTAATGTTGTTGGATGTGCGATTTTTGCAGTGATGTATAT AGTACTGCCAGAATCAATGTATCCGTATATAGGCATGATAGGTGGTATCGGAGTCGGATATTCCGCTGGTTATGCATGGC AGACAGCTTTTAATACATTTGGCGCATTATCAATTGCGGCGGGACTTTTTGGAATGCCTTATGCAGTTGCATTACGTATA GGACTGAATGCTGCCGGTGCTGCTTATACATGGCTGTGTGACAAGGTACTTGAAAGAATACATTCTGCAGTGCAGGCAAA GAATGCCAGCGTGGTGGAGTAA
Upstream 100 bases:
>100_bases TTTAATTATTTCTTAATTGACATAGGGGTGTAATCAGTGTTATATTACTCAACCCTGTTATTAAGCAAAATTTAAGGGGA GGAAAGGAAATCGGGAATTT
Downstream 100 bases:
>100_bases ATGTGACTACTATACTTTAGCACATTTTTCTGATAAAATTATATAAGGTATGCCGTTATGTGAATAAGTGCTGCCAGAAA CTATTAATATGTTAATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTFYQELQLSSAGSKQLIKNTQDSKEKRRHILIYNFKVYLVMIFCVAVVTVFSKLLGNNNSVVGVTVLLAVLVLRQADFG IKTSHGLVSIMGIYAILIAGPRVSNMVPPVAAFVINVVCIMLLMIMGCHNVIMYNHSTFVLGYLLLQGYDVTGHEYIMRV VGLLAGMLVCMIIFYKNQRNRPYRRTFWDLFKEFNINSARTRWYIKLTFIVSSAMLIVSLMGLPRAMWIGIACMSVCLPF SKDVDKRIGNRALFNVVGCAIFAVMYIVLPESMYPYIGMIGGIGVGYSAGYAWQTAFNTFGALSIAAGLFGMPYAVALRI GLNAAGAAYTWLCDKVLERIHSAVQAKNASVVE
Sequences:
>Translated_353_residues MTFYQELQLSSAGSKQLIKNTQDSKEKRRHILIYNFKVYLVMIFCVAVVTVFSKLLGNNNSVVGVTVLLAVLVLRQADFG IKTSHGLVSIMGIYAILIAGPRVSNMVPPVAAFVINVVCIMLLMIMGCHNVIMYNHSTFVLGYLLLQGYDVTGHEYIMRV VGLLAGMLVCMIIFYKNQRNRPYRRTFWDLFKEFNINSARTRWYIKLTFIVSSAMLIVSLMGLPRAMWIGIACMSVCLPF SKDVDKRIGNRALFNVVGCAIFAVMYIVLPESMYPYIGMIGGIGVGYSAGYAWQTAFNTFGALSIAAGLFGMPYAVALRI GLNAAGAAYTWLCDKVLERIHSAVQAKNASVVE >Mature_352_residues TFYQELQLSSAGSKQLIKNTQDSKEKRRHILIYNFKVYLVMIFCVAVVTVFSKLLGNNNSVVGVTVLLAVLVLRQADFGI KTSHGLVSIMGIYAILIAGPRVSNMVPPVAAFVINVVCIMLLMIMGCHNVIMYNHSTFVLGYLLLQGYDVTGHEYIMRVV GLLAGMLVCMIIFYKNQRNRPYRRTFWDLFKEFNINSARTRWYIKLTFIVSSAMLIVSLMGLPRAMWIGIACMSVCLPFS KDVDKRIGNRALFNVVGCAIFAVMYIVLPESMYPYIGMIGGIGVGYSAGYAWQTAFNTFGALSIAAGLFGMPYAVALRIG LNAAGAAYTWLCDKVLERIHSAVQAKNASVVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39152; Mature: 39021
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFYQELQLSSAGSKQLIKNTQDSKEKRRHILIYNFKVYLVMIFCVAVVTVFSKLLGNNN CCHHHHHHHCCCCCHHHHHCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC SVVGVTVLLAVLVLRQADFGIKTSHGLVSIMGIYAILIAGPRVSNMVPPVAAFVINVVCI CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH MLLMIMGCHNVIMYNHSTFVLGYLLLQGYDVTGHEYIMRVVGLLAGMLVCMIIFYKNQRN HHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPYRRTFWDLFKEFNINSARTRWYIKLTFIVSSAMLIVSLMGLPRAMWIGIACMSVCLPF CCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC SKDVDKRIGNRALFNVVGCAIFAVMYIVLPESMYPYIGMIGGIGVGYSAGYAWQTAFNTF CCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GALSIAAGLFGMPYAVALRIGLNAAGAAYTWLCDKVLERIHSAVQAKNASVVE HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TFYQELQLSSAGSKQLIKNTQDSKEKRRHILIYNFKVYLVMIFCVAVVTVFSKLLGNNN CHHHHHHHCCCCCHHHHHCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC SVVGVTVLLAVLVLRQADFGIKTSHGLVSIMGIYAILIAGPRVSNMVPPVAAFVINVVCI CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHH MLLMIMGCHNVIMYNHSTFVLGYLLLQGYDVTGHEYIMRVVGLLAGMLVCMIIFYKNQRN HHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPYRRTFWDLFKEFNINSARTRWYIKLTFIVSSAMLIVSLMGLPRAMWIGIACMSVCLPF CCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC SKDVDKRIGNRALFNVVGCAIFAVMYIVLPESMYPYIGMIGGIGVGYSAGYAWQTAFNTF CCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH GALSIAAGLFGMPYAVALRIGLNAAGAAYTWLCDKVLERIHSAVQAKNASVVE HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA