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The map label for this gene is yrbC [H]

Identifier: 238896699

GI number: 238896699

Start: 4677193

End: 4677828

Strand: Reverse

Name: yrbC [H]

Synonym: KP1_4914

Alternate gene names: 238896699

Gene position: 4677828-4677193 (Counterclockwise)

Preceding gene: 238896700

Following gene: 238896698

Centisome position: 89.13

GC content: 55.82

Gene sequence:

>636_bases
ATGTTTAAACGCTTACTCATGGTCGCCATGCTGGTGATTGCCCCGCTGACCGCCGTCCAGGCCGCAGATCAGTCCAATCC
GTATAAGCTGATGAATGAAGCGGCGCAGAAAACCTTCGATCGCCTGAAGAATGAACAGCCGAAGATTAAAGCTAATCCTA
ACTATCTGCGCGACATCGTCGACCAGGAGTTATTGCCGTATGTACAGGTAAAATATGCCGGCGCGCTGGTGCTGGGCCGC
TATTACAAAGAAGCGACCCCTGCGCAGCGTGAGGCCTATTTTGCCGCCTTCCGTGAATACCTGAAGCAGGCCTACGGTCA
GGCGCTGGCGATGTACCATGGGCAGACTTACCAGATTGCTCCGGAGCAGCCGCTGGGCAGCGCAACCATCGTTCCGATCC
GCGTCACTATCATCGACCCGAACGGTCGTCCGCCGGTACGTCTTGACTTCCAGTGGCGTAAAAATACCCAGACCGGCAAC
TGGCAGGCCTACGATATGATCGCGGAAGGGGTGAGCATGATCACCACCAAACAGAATGAGTGGAGCGATCTGCTGCGCAC
CAAGGGCGTTGATGGCCTGACCGCGCAGCTGAAAGCGATCTCTGCGCAGCCGATCACCCTGGAACAGAAAAAATAA

Upstream 100 bases:

>100_bases
CGACAATCAGAATTCTGGCAATGATAAGGCCGAGGCAGAAGGTCATACTGACGCGACGCCGGCAGCCGGCACGACGCATT
AATTTCAGGAGAAATACGAT

Downstream 100 bases:

>100_bases
TGAGCGGGCAGCTGAGCTGGACTCGCGAGGGCGAGACGCTGGCGCTGCACGGGGAGCTGGATCAGGATCTGCTGGTCCCG
CTCTGGGAGGCGCGCGCCCA

Product: putative ABC transport system ATP-binding and membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFKRLLMVAMLVIAPLTAVQAADQSNPYKLMNEAAQKTFDRLKNEQPKIKANPNYLRDIVDQELLPYVQVKYAGALVLGR
YYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGSATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGN
WQAYDMIAEGVSMITTKQNEWSDLLRTKGVDGLTAQLKAISAQPITLEQKK

Sequences:

>Translated_211_residues
MFKRLLMVAMLVIAPLTAVQAADQSNPYKLMNEAAQKTFDRLKNEQPKIKANPNYLRDIVDQELLPYVQVKYAGALVLGR
YYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGSATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGN
WQAYDMIAEGVSMITTKQNEWSDLLRTKGVDGLTAQLKAISAQPITLEQKK
>Mature_211_residues
MFKRLLMVAMLVIAPLTAVQAADQSNPYKLMNEAAQKTFDRLKNEQPKIKANPNYLRDIVDQELLPYVQVKYAGALVLGR
YYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGSATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGN
WQAYDMIAEGVSMITTKQNEWSDLLRTKGVDGLTAQLKAISAQPITLEQKK

Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family [H]

Homologues:

Organism=Escherichia coli, GI1789583, Length=211, Percent_Identity=89.0995260663507, Blast_Score=394, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023094
- InterPro:   IPR008869 [H]

Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]

EC number: NA

Molecular weight: Translated: 23926; Mature: 23926

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRLLMVAMLVIAPLTAVQAADQSNPYKLMNEAAQKTFDRLKNEQPKIKANPNYLRDIV
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DQELLPYVQVKYAGALVLGRYYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PEQPLGSATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGNWQAYDMIAEGVSMITTKQNE
CCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHEECCCHH
WSDLLRTKGVDGLTAQLKAISAQPITLEQKK
HHHHHHHCCCCCHHHHHHHHCCCCEEECCCC
>Mature Secondary Structure
MFKRLLMVAMLVIAPLTAVQAADQSNPYKLMNEAAQKTFDRLKNEQPKIKANPNYLRDIV
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DQELLPYVQVKYAGALVLGRYYKEATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
PEQPLGSATIVPIRVTIIDPNGRPPVRLDFQWRKNTQTGNWQAYDMIAEGVSMITTKQNE
CCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHHHEECCCHH
WSDLLRTKGVDGLTAQLKAISAQPITLEQKK
HHHHHHHCCCCCHHHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]