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The map label for this gene is ydjH [H]

Identifier: 238896640

GI number: 238896640

Start: 4619637

End: 4620587

Strand: Reverse

Name: ydjH [H]

Synonym: KP1_4845

Alternate gene names: 238896640

Gene position: 4620587-4619637 (Counterclockwise)

Preceding gene: 238896641

Following gene: 238896638

Centisome position: 88.04

GC content: 55.42

Gene sequence:

>951_bases
ATGAACGTAACCATTTGCACCATCGGCGAGCTGCTGGTGGAGTTTCTCGCCAAGGAAGAGAATCAGGGGTTTTCCCGTCC
AGGTGAATTTTGGGGGCCCTATCCCAGCGGGGCGCCGGCAATATTTGCCGATCAGGTGGCAAAGCTGGGTTTCGGCTCCG
TGTTGTTTAGCTGTGTGGGCAACGACGCATTTGGCGAGATGAATATTGCGCGGCTGGAGAAAGACGGCGTCAACGTCAAC
GGCATCGCTATGCTGCAGAAAGCGACTACCGGTAGCGCCTTCGTCAGCTATCGTAGCCAGGCGCAGCGCGATTTTATTTT
TAATATGCCTAACAGCGCCTGCGGTCTGCTGACTGCCGACCACATTGACGAAGCGTTGCTAAATCAGTGTCAGCATTTTC
ATATTATGGGGTCATCGCTATTCTCGTTCCGTATTATCGATGCGATGCGTAAAGCGATTAAAAACATTAAAGGCCGCAGC
GGCACAGTATCGTTCGACCCAAATATTCGCAAAGAGATGCTGAACATCCCGGAGATGTCGCAGGCCTTTGAATATATCCT
CGACTACACCGATATCTTCCTGCCGAGCGATGGCGAGCTGGATTACTTTGGTCTCAATCCGGAACGCAATGAGCAGGTCC
TGGTTGATAAGCTACTGAAACGCGGCGTGAAGCATGTGGTGATTAAACGCGGGCCGCGTGGCGCAAGCTACTTTAGCGCC
AACGAGACGCACCATGTCGCCGGCTTCAGCGTGCCGGTGGTGGATCCGACTGGTGCCGGGGATTGCTTTGGCGCCACTTT
TGTTAGTCTGTTCCTCAATGGCGCCACGCCCCGGGAGGCGCTGAGATGGGCAAACGCCAGCGGCTCGCTGGCGATTAGCC
AACGCGGCCCCATGGAAGGCACCTCGACGCAGGCGGAGATCAGCGCTTTTCTTGCCGCCCAGCATCCCTAA

Upstream 100 bases:

>100_bases
ATGCCTGCTTCCTCGCCGCGGGTTTGACCAACAGCTATACCAACAATGAATGCCTGACATGGCTTAACACGGCTTTGCAT
AAGACAAACCAGGAGCGGTG

Downstream 100 bases:

>100_bases
CCAACAAGCCCGGATAGATCCGGGCTAAAAGTGGTTAAATCCTTACGCTCTCGATCAGGTTACCGGCGCCGGGTTAAATA
CCGCCAGCTGGTTGTGCAGG

Product: putative kinase

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVGNDAFGEMNIARLEKDGVNVN
GIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTADHIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIKNIKGRS
GTVSFDPNIRKEMLNIPEMSQAFEYILDYTDIFLPSDGELDYFGLNPERNEQVLVDKLLKRGVKHVVIKRGPRGASYFSA
NETHHVAGFSVPVVDPTGAGDCFGATFVSLFLNGATPREALRWANASGSLAISQRGPMEGTSTQAEISAFLAAQHP

Sequences:

>Translated_316_residues
MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVGNDAFGEMNIARLEKDGVNVN
GIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTADHIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIKNIKGRS
GTVSFDPNIRKEMLNIPEMSQAFEYILDYTDIFLPSDGELDYFGLNPERNEQVLVDKLLKRGVKHVVIKRGPRGASYFSA
NETHHVAGFSVPVVDPTGAGDCFGATFVSLFLNGATPREALRWANASGSLAISQRGPMEGTSTQAEISAFLAAQHP
>Mature_316_residues
MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVGNDAFGEMNIARLEKDGVNVN
GIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTADHIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIKNIKGRS
GTVSFDPNIRKEMLNIPEMSQAFEYILDYTDIFLPSDGELDYFGLNPERNEQVLVDKLLKRGVKHVVIKRGPRGASYFSA
NETHHVAGFSVPVVDPTGAGDCFGATFVSLFLNGATPREALRWANASGSLAISQRGPMEGTSTQAEISAFLAAQHP

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=272, Percent_Identity=24.2647058823529, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082281, Length=311, Percent_Identity=23.1511254019293, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1790193, Length=264, Percent_Identity=24.2424242424242, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=314, Percent_Identity=23.8853503184713, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 34401; Mature: 34401

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVG
CCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NDAFGEMNIARLEKDGVNVNGIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTAD
CCCCCCCHHEEHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCCCHHHH
HIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIKNIKGRSGTVSFDPNIRKEMLNIPEMS
HHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCHH
QAFEYILDYTDIFLPSDGELDYFGLNPERNEQVLVDKLLKRGVKHVVIKRGPRGASYFSA
HHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCCC
NETHHVAGFSVPVVDPTGAGDCFGATFVSLFLNGATPREALRWANASGSLAISQRGPMEG
CCCEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCCC
TSTQAEISAFLAAQHP
CCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVG
CCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NDAFGEMNIARLEKDGVNVNGIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTAD
CCCCCCCHHEEHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCCCHHHH
HIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIKNIKGRSGTVSFDPNIRKEMLNIPEMS
HHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCHH
QAFEYILDYTDIFLPSDGELDYFGLNPERNEQVLVDKLLKRGVKHVVIKRGPRGASYFSA
HHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCCC
NETHHVAGFSVPVVDPTGAGDCFGATFVSLFLNGATPREALRWANASGSLAISQRGPMEG
CCCEEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCCC
TSTQAEISAFLAAQHP
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]