Click here to switch to the map view.

The map label for this gene is garK [H]

Identifier: 238896635

GI number: 238896635

Start: 4613363

End: 4614541

Strand: Reverse

Name: garK [H]

Synonym: KP1_4838

Alternate gene names: 238896635

Gene position: 4614541-4613363 (Counterclockwise)

Preceding gene: 238896636

Following gene: 238896632

Centisome position: 87.92

GC content: 60.22

Gene sequence:

>1179_bases
TTGCCTTGCGCGGCACTGTCAGGCTACAAAATTATGAAAATCGTCATTGCCCCAGACTCTTACAAAGAAAGCCTGTCTGC
CAGCGAGGTAGCTCAGGCGATAGAAAAAGGATTTCGGGAAATTTTCCCTGATGCACAGTATGTTTCCCTGCCCGTCGCCG
ACGGCGGCGAGGGGACGGTGGAAGCCATGATTGCCGCCACGCAGGGAAAGGAACATTTCGCATGGGTAACGGGTCCGCTG
GGTGAGAGAGTGAAGGCCTGCTGGGGCATGTCCGGCGACGGCGTCACCGCGTTTATTGAGATGGCGGCAGCCAGCGGTCT
GGGGCTCGTTCCGCCCGACAAACGTAACCCGCTCATCACCACTTCACGGGGTACCGGGGAGCTAATATTACAGGCGCTGG
AGCATGGTGCGGAACGGATCATTATCGGCATCGGCGGTAGTGCGACCAACGACGGTGGGGCGGGTATGATGCAGGCGCTA
GGCGCCCGCCTCTGTGACGCCGAGGGACAAGAGATCGGCCATGGCGGGGGCAACCTCGGCAGTCTGAGCCGGATCGATCT
TTCCGCCATCGATCCGCGCTTACGTGACAGGATGATTCACGTGGCCTGCGATGTTACCAACCCGCTGGTGGGCGAGCGTG
GGGCGTCGCGGATCTTTGGCCCACAGAAAGGGGCGACCGAGGCGATGATCGTCGAGCTGGATCGTAATCTGGCGCATTAT
GCCGACGTCATTAAGGCGTCGCTGCAGGTGGACGTGAAGTCGATCCCCGGCGCGGGAGCGGCCGGCGGCATGGGCGCGGC
GCTGATGGCCTTTCTCAATGCGGAGCTGCGCAGCGGGATTGAGATCGTTACCGAGGCACTGAAGCTGGAAGAACAGATCC
ATGACTGCTCACTGGTGGTCACCGGGGAAGGGCGGCTCGATAGCCAGTCTGTTCACGGTAAGGTGCCGGTGGGGGTGGCC
CGGGTGGCGAAGAAATACCGTAAGCCGGTGATCGGTATTGCTGGCAGCCTGACTCACGATGTCGGCGTGGTTCACCAGCA
CGGTATCGATGCCGTATTCAGCGTGTTAACTTCCGTTTCGACGCTGGAAGAGGCATTTCGCGGGGCGTTTGATAATATTT
ACCGCGCGTCGCGTAATATTGCTGCCACCCTGCAGGTTGGGATGACCACTGAGGGATGA

Upstream 100 bases:

>100_bases
GGCACTGCAGACCATAGCGCGCTGGCGTGCTATTACGAAAAACTGGCGAAAGTGGAAGTCACTCGCTAACAAGAAGGGCG
CCCTGCGCGCCCTGTTATGC

Downstream 100 bases:

>100_bases
CAACGGGCGGTAAACCCTCTATACTGCGCGCCGAAGCTGACCAGACAGTCGCCGCTTCGTCGTCGTCCTCCTTCGGGGGG
AGACGGGCGGAGGGGAGGAA

Product: glycerate kinase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPCAALSGYKIMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTVEAMIAATQGKEHFAWVTGPL
GERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLITTSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQAL
GARLCDAEGQEIGHGGGNLGSLSRIDLSAIDPRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHY
ADVIKASLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVVTGEGRLDSQSVHGKVPVGVA
RVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVSTLEEAFRGAFDNIYRASRNIAATLQVGMTTEG

Sequences:

>Translated_392_residues
MPCAALSGYKIMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTVEAMIAATQGKEHFAWVTGPL
GERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLITTSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQAL
GARLCDAEGQEIGHGGGNLGSLSRIDLSAIDPRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHY
ADVIKASLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVVTGEGRLDSQSVHGKVPVGVA
RVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVSTLEEAFRGAFDNIYRASRNIAATLQVGMTTEG
>Mature_391_residues
PCAALSGYKIMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTVEAMIAATQGKEHFAWVTGPLG
ERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLITTSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQALG
ARLCDAEGQEIGHGGGNLGSLSRIDLSAIDPRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHYA
DVIKASLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVVTGEGRLDSQSVHGKVPVGVAR
VAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVSTLEEAFRGAFDNIYRASRNIAATLQVGMTTEG

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=381, Percent_Identity=82.1522309711286, Blast_Score=607, Evalue=1e-175,
Organism=Escherichia coli, GI1786724, Length=376, Percent_Identity=55.8510638297872, Blast_Score=397, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 40850; Mature: 40719

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCAALSGYKIMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTV
CCCCCCCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCE
EAMIAATQGKEHFAWVTGPLGERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLIT
EEEEEECCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
TSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQALGARLCDAEGQEIGHGGGNLG
ECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
SLSRIDLSAIDPRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHY
CCCCCCHHHCCHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH
ADVIKASLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVV
HHHHHHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TGEGRLDSQSVHGKVPVGVARVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVS
ECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHH
TLEEAFRGAFDNIYRASRNIAATLQVGMTTEG
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure 
PCAALSGYKIMKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTV
CCCCCCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCE
EAMIAATQGKEHFAWVTGPLGERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLIT
EEEEEECCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEE
TSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQALGARLCDAEGQEIGHGGGNLG
ECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
SLSRIDLSAIDPRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHY
CCCCCCHHHCCHHHHHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH
ADVIKASLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVV
HHHHHHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TGEGRLDSQSVHGKVPVGVARVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVS
ECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHH
TLEEAFRGAFDNIYRASRNIAATLQVGMTTEG
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1705543; 9278503 [H]