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The map label for this gene is yqiB [H]

Identifier: 238896541

GI number: 238896541

Start: 4520713

End: 4521135

Strand: Reverse

Name: yqiB [H]

Synonym: KP1_4728

Alternate gene names: 238896541

Gene position: 4521135-4520713 (Counterclockwise)

Preceding gene: 238896542

Following gene: 238896540

Centisome position: 86.14

GC content: 52.48

Gene sequence:

>423_bases
ATGAAGCGTTATACACCTGACTTCCCTGAGATGATGCGCCTGTGCGAGACCAACTTCGCGCAGTTGCGCCGCCTGTTGCC
GCGAACGGATGCAGCGGGTGAGAAGGTAAGCTATCAGGTGGGAAGCGCGCAGTATCGGTTAACGATAGTTGAATCGACCC
GCTACACTACTCTGGTGGCAATAGAGCAGACTCTGCCTGCAGTGAGCTACTGGAGCCTGCCATCGATGACCGTCCGCCTC
TACCATGACGCCATGGTGGCCGAAGTGTGTTCGAGTCAGCAGATCTTTCGCTTCAAAGCGCGATATGATTATCCTAATAA
AAAGTTGCATCAACGCGACGAAAAGCATCAAATTAACCAGTTTTTGGCCGACTGGCTGCGTTACTGTTTAGCACATGGAG
CGATGGCGATTCCGGTTTGTTAG

Upstream 100 bases:

>100_bases
ACCAGTGGGTAGAAGAGGGGAAAATCGACAACGCAGCCTCTGTCATCGCCTTGCAATGGCTGCAATTGCATTATCACAAT
TTACGAAATGAGTGGACAAA

Downstream 100 bases:

>100_bases
CGTCGTTAAACCTAAGGACACCATTTGGAAAGCCTGTTAAACCTACCTCTGGCTGGTGAGGCCAGAGTCAGGATATTACA
AATTACTGATACTCACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKRYTPDFPEMMRLCETNFAQLRRLLPRTDAAGEKVSYQVGSAQYRLTIVESTRYTTLVAIEQTLPAVSYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVC

Sequences:

>Translated_140_residues
MKRYTPDFPEMMRLCETNFAQLRRLLPRTDAAGEKVSYQVGSAQYRLTIVESTRYTTLVAIEQTLPAVSYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVC
>Mature_140_residues
MKRYTPDFPEMMRLCETNFAQLRRLLPRTDAAGEKVSYQVGSAQYRLTIVESTRYTTLVAIEQTLPAVSYWSLPSMTVRL
YHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVC

Specific function: Unknown

COG id: COG3151

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789411, Length=139, Percent_Identity=92.8057553956834, Blast_Score=276, Evalue=5e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009659 [H]

Pfam domain/function: PF06853 DUF1249 [H]

EC number: NA

Molecular weight: Translated: 16387; Mature: 16387

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYTPDFPEMMRLCETNFAQLRRLLPRTDAAGEKVSYQVGSAQYRLTIVESTRYTTLVA
CCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEE
IEQTLPAVSYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ
EHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCHHHHHHHHHHHHHH
FLADWLRYCLAHGAMAIPVC
HHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure
MKRYTPDFPEMMRLCETNFAQLRRLLPRTDAAGEKVSYQVGSAQYRLTIVESTRYTTLVA
CCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEE
IEQTLPAVSYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ
EHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCCHHHHHHHHHHHHHH
FLADWLRYCLAHGAMAIPVC
HHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]