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The map label for this gene is cpdA [H]

Identifier: 238896540

GI number: 238896540

Start: 4519861

End: 4520688

Strand: Reverse

Name: cpdA [H]

Synonym: KP1_4727

Alternate gene names: 238896540

Gene position: 4520688-4519861 (Counterclockwise)

Preceding gene: 238896541

Following gene: 238896539

Centisome position: 86.13

GC content: 58.94

Gene sequence:

>828_bases
TTGGAAAGCCTGTTAAACCTACCTCTGGCTGGTGAGGCCAGAGTCAGGATATTACAAATTACTGATACTCACCTGTTTGC
TGAAAAGCATGAAACGTTGTTAGGCATCAATACCTGGGATAGCTATCAGGCCGTACTGTCGGCCATTCATGCCTCACAGC
GTCCATGCGATCTGATTGTCGCAACAGGCGATCTGGCGCAGGACCACTCCTCCGCGGCCTATCAGCATTTTGCTGAGGGC
ATCGCGAGTTTTGCTGCACCCTGCGTCTGGCTACCGGGCAACCATGATTTCCAGCCGGCGATGTACAGCACCCTGCAGGA
GGCGGGCATTTCCCCTGCCAAGCGCGTGTTTCTCGGCGATCGCTGGCAGATCCTGCTGCTCGACAGCCAGGTGTTTGGCG
TTCCCCATGGCGAGCTGAGCGACTTCCAGCTGGAGTGGCTCGAACATAAGCTGGCGGAGGCGCCGGAGCGCTATACCTTA
CTCCTGCTGCACCATCATCCGCTGCCGGCCGGCTGCAGCTGGCTGGATCAGCATAGTCTGCGCAATGCCGGCGCGCTGGA
CAGCGCGTTGAGCGCCTGGCCGCGGGTGAAGCATCTTTTGTGCGGCCATATTCATCAGGAACTGGATCTCGACTGGAATG
GCCGGCGCATGATGGCGACGCCGTCGACCTGCGTCCAGTTTAAACCGCACTGTGCCAATTTCACTCTGGATACGGTGTCA
CCGGGCTGGCGCTGGCTGGAGCTTCACCCTGACGGGACGCTGACCACCGAAGTGTGCCGCCTGGAAGGCGCCGCGTTTCA
TCCGGATATTGCTTCAGAAGGCTACTGA

Upstream 100 bases:

>100_bases
TCAAATTAACCAGTTTTTGGCCGACTGGCTGCGTTACTGTTTAGCACATGGAGCGATGGCGATTCCGGTTTGTTAGCGTC
GTTAAACCTAAGGACACCAT

Downstream 100 bases:

>100_bases
TGGCGACGCTCCTTTATCTGCACGGCTTTAACAGCTCTCCGCGCTCGGCGAAGGCGACGGCGTTAAAGACCTGGCTGGCG
CAGCACTATCCTGAGATCAC

Product: cyclic 3',5'-adenosine monophosphate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MESLLNLPLAGEARVRILQITDTHLFAEKHETLLGINTWDSYQAVLSAIHASQRPCDLIVATGDLAQDHSSAAYQHFAEG
IASFAAPCVWLPGNHDFQPAMYSTLQEAGISPAKRVFLGDRWQILLLDSQVFGVPHGELSDFQLEWLEHKLAEAPERYTL
LLLHHHPLPAGCSWLDQHSLRNAGALDSALSAWPRVKHLLCGHIHQELDLDWNGRRMMATPSTCVQFKPHCANFTLDTVS
PGWRWLELHPDGTLTTEVCRLEGAAFHPDIASEGY

Sequences:

>Translated_275_residues
MESLLNLPLAGEARVRILQITDTHLFAEKHETLLGINTWDSYQAVLSAIHASQRPCDLIVATGDLAQDHSSAAYQHFAEG
IASFAAPCVWLPGNHDFQPAMYSTLQEAGISPAKRVFLGDRWQILLLDSQVFGVPHGELSDFQLEWLEHKLAEAPERYTL
LLLHHHPLPAGCSWLDQHSLRNAGALDSALSAWPRVKHLLCGHIHQELDLDWNGRRMMATPSTCVQFKPHCANFTLDTVS
PGWRWLELHPDGTLTTEVCRLEGAAFHPDIASEGY
>Mature_275_residues
MESLLNLPLAGEARVRILQITDTHLFAEKHETLLGINTWDSYQAVLSAIHASQRPCDLIVATGDLAQDHSSAAYQHFAEG
IASFAAPCVWLPGNHDFQPAMYSTLQEAGISPAKRVFLGDRWQILLLDSQVFGVPHGELSDFQLEWLEHKLAEAPERYTL
LLLHHHPLPAGCSWLDQHSLRNAGALDSALSAWPRVKHLLCGHIHQELDLDWNGRRMMATPSTCVQFKPHCANFTLDTVS
PGWRWLELHPDGTLTTEVCRLEGAAFHPDIASEGY

Specific function: Affects the expression of the lacZ gene [H]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789410, Length=275, Percent_Identity=83.6363636363636, Blast_Score=454, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 30673; Mature: 30673

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLLNLPLAGEARVRILQITDTHLFAEKHETLLGINTWDSYQAVLSAIHASQRPCDLIV
CCCHHCCCCCCCCEEEEEEEECCHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
ATGDLAQDHSSAAYQHFAEGIASFAAPCVWLPGNHDFQPAMYSTLQEAGISPAKRVFLGD
ECCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECC
RWQILLLDSQVFGVPHGELSDFQLEWLEHKLAEAPERYTLLLLHHHPLPAGCSWLDQHSL
CEEEEEECCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH
RNAGALDSALSAWPRVKHLLCGHIHQELDLDWNGRRMMATPSTCVQFKPHCANFTLDTVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEEECCCCCCEEEECCC
PGWRWLELHPDGTLTTEVCRLEGAAFHPDIASEGY
CCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MESLLNLPLAGEARVRILQITDTHLFAEKHETLLGINTWDSYQAVLSAIHASQRPCDLIV
CCCHHCCCCCCCCEEEEEEEECCHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
ATGDLAQDHSSAAYQHFAEGIASFAAPCVWLPGNHDFQPAMYSTLQEAGISPAKRVFLGD
ECCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHHEEEECC
RWQILLLDSQVFGVPHGELSDFQLEWLEHKLAEAPERYTLLLLHHHPLPAGCSWLDQHSL
CEEEEEECCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH
RNAGALDSALSAWPRVKHLLCGHIHQELDLDWNGRRMMATPSTCVQFKPHCANFTLDTVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEEECCCCCCEEEECCC
PGWRWLELHPDGTLTTEVCRLEGAAFHPDIASEGY
CCEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]