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The map label for this gene is recN [H]

Identifier: 238896061

GI number: 238896061

Start: 4028660

End: 4030321

Strand: Direct

Name: recN [H]

Synonym: KP1_4194

Alternate gene names: 238896061

Gene position: 4028660-4030321 (Clockwise)

Preceding gene: 238896060

Following gene: 238896062

Centisome position: 76.76

GC content: 62.45

Gene sequence:

>1662_bases
ATGTTGGCGCAACTCACCATCAGTAATTTTGCTATCGTTCGTGAACTGGAAATTGATTTCCACAGCGGCATGACCGCCAT
CACCGGGGAAACCGGCGCCGGGAAATCCATTGCCATCGACGCGCTGGGGCTGTGCCTCGGCGGCAGAGCGGAAGCCGACA
TGGTGCGTCGCGGCGCCACCCGTGCCGACCTGTGCGCGCGCTTCGCGCTGAAAGATACCCCTGCCGCCCAGCGCTGGCTG
GAAGAGAATCAGCTGGAGAGCGGGCGTGAGTGTTTACTTCGCCGGGTGATCAGCGCCGACGGCCGCTCGCGCGGCTTCAT
CAACGGCACCGCCGTCCCGCTCTCGCAGCTGCGCGAGCTGGGCCAGCTGCTGATCCAGATCCACGGCCAGCATGCCCACC
AGCTGCTGACCAAACCCGAACACCAAAAAACGCTGCTCGACGGCTATACCGGTGAGTATGCGCTTACTCAGCGTATGGCC
GAGCACTATCGCCAGTGGCACCAGAGCTGCCGCGAGTTGGCCCAGCATCAGCAGCAGAGCCAGGAGCGCGCCGCCCGCGC
CGATCTGCTGCAGTATCAGCTTAAAGAGCTGAACGAATTTAACCCGCTGCCGGGAGAATTCGAGCAGATTGACGAAGAGT
ACAAGCGCCTGGCCAACAGCGGCCAGCTGCTCAGCACCTGCCAGCACGCCCTTACGGTACTGGCGGACGGCGAAGAGGCC
AATCTGCAGAGCCAGCTTTATACCGCGAAGCAGCTGGTCAGCGAGCTGGTGGGCATGGACAGCAAGCTTTCCGGCGTCCT
GGATATGCTGGAAGAGGCGGCCATTCAGCTCAGCGAGGCCAGCGACGAGTTGCGCCACTACCATGACCGTCTGGATCTCG
ATCCGAACCGTCTGTTTGAACTTGAGCAACGGATTTCCCGACAAATCGCGCTGGCGCGTAAACATCAGGTGATGCCGGAA
GAGCTGCCGGCGGTTTATCAGGCGATGCTGGAAGAGCAGCGCCTGCTGGACGACAGCGCCGGCTCGCTGGAATCCCTCAG
CCAGCAGGTGGTCGAACATCATCAGCTGGCGCTGGAGACCGCGCGCCAGCTGCATGTCCTGCGCCAGGCCAGCGCCGACG
AGCTGACCCAGCTTATCACTGAGAGTATGCACTCACTTTCGATGCCGCACGGGGTCTTCGCGATTGAGGTCGCGTTCGAT
GAACGCCATCTCACCGCCGACGGCGCCGACCATATTGAGTTCCGCGTCACCACTAACCCAGGTCAGCCGCTGCAGCCAAT
CGCCAAAGTGGCCTCCGGGGGCGAACTGTCGCGCATTGCGCTGGCGATTCAGGTGATCACCGCGCGTAAAATGGAAACCC
CGGCGCTGATTTTCGACGAAGTGGACGTCGGTATCAGCGGCCCCACCGCCGCCGTGGTCGGCAAGCTGCTGCGCCAGCTG
GGCGAGTCCACGCAGGTGATGTGCGTGACCCACCTGCCGCAGGTCGCAGGCTGCGGCCACCATCATTTCTTTGTCTGCAA
AGAGACCGATGGCGAGATGACCGAAACCCATATGCAGCCGCTGGATAAACGTGCTCGCTTGCAGGAGCTGGCCCGTCTGC
TGGGCGGCAGCGAAGTCACGCGCAACACCCTGGCGAACGCGAAAGAGTTGCTTGCGGCGTAA

Upstream 100 bases:

>100_bases
AAAAATTGTTCTGATTTTCACGGCTGCCTCTTTACTGGATAAAAAACCAGTCTATACTGTACGAAAACACAGTATTGGTT
TTTCATACAGGAAGGCAGCT

Downstream 100 bases:

>100_bases
ACTTTTTGATTTTCACAGGGTCATAGTGAACAGCAAATTGCCTGCTGACCTGCAGCCGGAGGTTTCCAACGGCGCGAAGG
TCTATTATTATCGGCATATT

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWL
EENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMA
EHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEA
NLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPE
ELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHVLRQASADELTQLITESMHSLSMPHGVFAIEVAFD
ERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL
GESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA

Sequences:

>Translated_553_residues
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWL
EENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMA
EHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEA
NLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPE
ELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHVLRQASADELTQLITESMHSLSMPHGVFAIEVAFD
ERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL
GESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
>Mature_553_residues
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWL
EENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMA
EHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEA
NLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPE
ELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHVLRQASADELTQLITESMHSLSMPHGVFAIEVAFD
ERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL
GESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=84.9909584086799, Blast_Score=954, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61390; Mature: 61390

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGAT
CCCEEEHHHHHHHHEEEEHHHCCCEEEECCCCCCCEEHHHHHHHHCCCCCHHHHHHCCCC
RADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLREL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELAQHQQQS
HHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
NLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALET
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ARQLHVLRQASADELTQLITESMHSLSMPHGVFAIEVAFDERHLTADGADHIEFRVTTNP
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC
GQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVT
CCCCEEEEEECCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RNTLANAKELLAA
HHHHHHHHHHHCC
>Mature Secondary Structure
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGAT
CCCEEEHHHHHHHHEEEEHHHCCCEEEECCCCCCCEEHHHHHHHHCCCCCHHHHHHCCCC
RADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLREL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELAQHQQQS
HHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
NLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALET
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ARQLHVLRQASADELTQLITESMHSLSMPHGVFAIEVAFDERHLTADGADHIEFRVTTNP
HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC
GQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVT
CCCCEEEEEECCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RNTLANAKELLAA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]