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The map label for this gene is ybbY [H]

Identifier: 238893474

GI number: 238893474

Start: 1320846

End: 1322156

Strand: Direct

Name: ybbY [H]

Synonym: KP1_1368

Alternate gene names: 238893474

Gene position: 1320846-1322156 (Clockwise)

Preceding gene: 238893473

Following gene: 238893475

Centisome position: 25.17

GC content: 52.94

Gene sequence:

>1311_bases
ATGGTGGTATTGCCGCTAAATAAACGTAACACCCTGGCGGGGTTTCAATGGTTCTTCTTTATTTTCTGCAACACCGTTGT
GGTACCGCCAACATTACAGTCTGCTTTTCAGCTCCCTGCCAGCGCGTTAATTACGCTTACCCAGTACGGGTTTATCACCA
CTGGATTGGCCTGTCTGGCGCAAGCGTTACTGGGACATCGTCGGGCGATTATGGAAGGACCGACGGGCCTGTGGTGGAGC
ACCATTCTGACGGTCACCGTGGGCGAAGCCGCACGGGGGACGCCGTTCGACAGCATCGCCTCCAGCCTGGCTGTCGGCAT
ATTTTTCTCGGCGGCGCTCACCATCATTATTGGCGTAAGTGGCATTGGCCATCGCCTGGCGAAGCTGTTCAGCCCAACGG
TAATGGTCTTTTTCATGCTGCTGCTGGGCGCGCAGCTGACTACCATCTTTTTTAAAGGCATGCTTGGGCTGCCCTTTAGT
TCGACGCAGGTTAATCCGGGTATTCAGCTGGCACCATTTTGCCTGGCGCTGTCGGTGATGATTCTGGTGCTGGGAATGAT
CATTTTTCTCCCGGATGGTATCGCTCGCTACGCCTTACTGATCGGCACTCTGGCGGGCTGGGCTGGCTGGCATCTGCTGT
TTCGCATGCCTCCCGCTACGGTAGCCTCAGGCCCCATTCACTGGCAGTGGTTCCCGCTGGGTTACGGCGGCCAGCTACGA
CCCGGCATCATTTTAACCGCCCTGCTGGCGGGACTGGTTAATATTACCAATACCTATGGCGCCATTCGCAGCACCGATGT
TTTTTACCCCCAACAGGGAGCCAGTAATACCCGCTATCGACGCAGCTTTATAATCTCCGGTTTGATAACATTAATAACGG
TTCCGCTCAACGTGGTGCCATTTTCCCCCTTTGTTTCGTCGACAGCTTTATTAACTCAAACTGGCGACACCTCGTGCCGG
CCATTTATTATCGGCTGTTTGTGCTGTCTGCTGGTTGGATTATTTACGCCGCTGACCCACTTTTTTACCACCCTACCTTT
ACCGATCAGCAGTGCGGTCATGCTGGTCTCTTACCTGCCGTTGTTATATTCCAGTTTATCTTTCAGTAAGCAAATTACCT
TTACCGCGCGAAATATCTATCGGCTGGCTCTGCCGTTATTTGTCGGCATTTTTTTGATGGGGCTACCGCCGGTTTATCTC
CAGACGTTGCCTCTGACAATCAGACCACTCTTAGGTAACGGCTTACTAATCGGGGTGCTGCTGGCGGTAGCCATGGAGAA
TCTCATTCCCTGGGATCGTATTAAGTCATGA

Upstream 100 bases:

>100_bases
TCACCCTATCCCTCTTCCTAAAAGGGGAGAGGGGACCGTTTCTCGCCCCATTCCATATTTAGCGTCTGTTTAACGGCAGG
CGCTTTTTCAGGATTTCATC

Downstream 100 bases:

>100_bases
CATTAAAAGGATGAACAATGAAAATTATTATTGCACCAGACTCGTTCAAAGAAAGCGTCAGCGCCAGTCGCTGCGCTCAG
GCGATTAAGGCGGGCTTCGT

Product: putative purine permease YbbY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MVVLPLNKRNTLAGFQWFFFIFCNTVVVPPTLQSAFQLPASALITLTQYGFITTGLACLAQALLGHRRAIMEGPTGLWWS
TILTVTVGEAARGTPFDSIASSLAVGIFFSAALTIIIGVSGIGHRLAKLFSPTVMVFFMLLLGAQLTTIFFKGMLGLPFS
STQVNPGIQLAPFCLALSVMILVLGMIIFLPDGIARYALLIGTLAGWAGWHLLFRMPPATVASGPIHWQWFPLGYGGQLR
PGIILTALLAGLVNITNTYGAIRSTDVFYPQQGASNTRYRRSFIISGLITLITVPLNVVPFSPFVSSTALLTQTGDTSCR
PFIIGCLCCLLVGLFTPLTHFFTTLPLPISSAVMLVSYLPLLYSSLSFSKQITFTARNIYRLALPLFVGIFLMGLPPVYL
QTLPLTIRPLLGNGLLIGVLLAVAMENLIPWDRIKS

Sequences:

>Translated_436_residues
MVVLPLNKRNTLAGFQWFFFIFCNTVVVPPTLQSAFQLPASALITLTQYGFITTGLACLAQALLGHRRAIMEGPTGLWWS
TILTVTVGEAARGTPFDSIASSLAVGIFFSAALTIIIGVSGIGHRLAKLFSPTVMVFFMLLLGAQLTTIFFKGMLGLPFS
STQVNPGIQLAPFCLALSVMILVLGMIIFLPDGIARYALLIGTLAGWAGWHLLFRMPPATVASGPIHWQWFPLGYGGQLR
PGIILTALLAGLVNITNTYGAIRSTDVFYPQQGASNTRYRRSFIISGLITLITVPLNVVPFSPFVSSTALLTQTGDTSCR
PFIIGCLCCLLVGLFTPLTHFFTTLPLPISSAVMLVSYLPLLYSSLSFSKQITFTARNIYRLALPLFVGIFLMGLPPVYL
QTLPLTIRPLLGNGLLIGVLLAVAMENLIPWDRIKS
>Mature_436_residues
MVVLPLNKRNTLAGFQWFFFIFCNTVVVPPTLQSAFQLPASALITLTQYGFITTGLACLAQALLGHRRAIMEGPTGLWWS
TILTVTVGEAARGTPFDSIASSLAVGIFFSAALTIIIGVSGIGHRLAKLFSPTVMVFFMLLLGAQLTTIFFKGMLGLPFS
STQVNPGIQLAPFCLALSVMILVLGMIIFLPDGIARYALLIGTLAGWAGWHLLFRMPPATVASGPIHWQWFPLGYGGQLR
PGIILTALLAGLVNITNTYGAIRSTDVFYPQQGASNTRYRRSFIISGLITLITVPLNVVPFSPFVSSTALLTQTGDTSCR
PFIIGCLCCLLVGLFTPLTHFFTTLPLPISSAVMLVSYLPLLYSSLSFSKQITFTARNIYRLALPLFVGIFLMGLPPVYL
QTLPLTIRPLLGNGLLIGVLLAVAMENLIPWDRIKS

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=435, Percent_Identity=70.3448275862069, Blast_Score=607, Evalue=1e-175,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 47209; Mature: 47209

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLPLNKRNTLAGFQWFFFIFCNTVVVPPTLQSAFQLPASALITLTQYGFITTGLACLA
CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
QALLGHRRAIMEGPTGLWWSTILTVTVGEAARGTPFDSIASSLAVGIFFSAALTIIIGVS
HHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GIGHRLAKLFSPTVMVFFMLLLGAQLTTIFFKGMLGLPFSSTQVNPGIQLAPFCLALSVM
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ILVLGMIIFLPDGIARYALLIGTLAGWAGWHLLFRMPPATVASGPIHWQWFPLGYGGQLR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCC
PGIILTALLAGLVNITNTYGAIRSTDVFYPQQGASNTRYRRSFIISGLITLITVPLNVVP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCC
FSPFVSSTALLTQTGDTSCRPFIIGCLCCLLVGLFTPLTHFFTTLPLPISSAVMLVSYLP
CCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LLYSSLSFSKQITFTARNIYRLALPLFVGIFLMGLPPVYLQTLPLTIRPLLGNGLLIGVL
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEHHHCCHHHHHHH
LAVAMENLIPWDRIKS
HHHHHHHCCCHHHCCC
>Mature Secondary Structure
MVVLPLNKRNTLAGFQWFFFIFCNTVVVPPTLQSAFQLPASALITLTQYGFITTGLACLA
CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
QALLGHRRAIMEGPTGLWWSTILTVTVGEAARGTPFDSIASSLAVGIFFSAALTIIIGVS
HHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GIGHRLAKLFSPTVMVFFMLLLGAQLTTIFFKGMLGLPFSSTQVNPGIQLAPFCLALSVM
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ILVLGMIIFLPDGIARYALLIGTLAGWAGWHLLFRMPPATVASGPIHWQWFPLGYGGQLR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCCC
PGIILTALLAGLVNITNTYGAIRSTDVFYPQQGASNTRYRRSFIISGLITLITVPLNVVP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCC
FSPFVSSTALLTQTGDTSCRPFIIGCLCCLLVGLFTPLTHFFTTLPLPISSAVMLVSYLP
CCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LLYSSLSFSKQITFTARNIYRLALPLFVGIFLMGLPPVYLQTLPLTIRPLLGNGLLIGVL
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEHHHCCHHHHHHH
LAVAMENLIPWDRIKS
HHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]