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The map label for this gene is rpmJ

Identifier: 238893424

GI number: 238893424

Start: 1264648

End: 1264788

Strand: Direct

Name: rpmJ

Synonym: KP1_1311

Alternate gene names: 238893424

Gene position: 1264648-1264788 (Clockwise)

Preceding gene: 238893423

Following gene: 238893426

Centisome position: 24.1

GC content: 54.61

Gene sequence:

>141_bases
ATGCAGGTCGTCAACTCATTACGTAGCGCTAAACAGCGCCACCCGGATTGCCAGCTGGTTAAACGCAAAGGGCGGCTGTA
CGTTATCTGTAAGAGCAACCCCCGCTTCAAAGCGGTGCAGGGGCGCAAAAAACGCCGTTAA

Upstream 100 bases:

>100_bases
CATACTACACGGGCAAACAAAAAACCTTCGCCAATGAAGGCAGTGCAGCCCGATTCCGCCAGCGCTTCGGCGGCTTTATT
GATGCGAAAAGGAAAGCATG

Downstream 100 bases:

>100_bases
CGGAAACTCTCCAGCGAGCGGCGCTGTTGGCCGTCGGCGGTAAAATTGTCGGCGGCCAGCCATTGGCGCATGGCGTTATC
CAGCTCCGGCCATTCGCCGT

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MQVVNSLRSAKQRHPDCQLVKRKGRLYVICKSNPRFKAVQGRKKRR

Sequences:

>Translated_46_residues
MQVVNSLRSAKQRHPDCQLVKRKGRLYVICKSNPRFKAVQGRKKRR
>Mature_46_residues
MQVVNSLRSAKQRHPDCQLVKRKGRLYVICKSNPRFKAVQGRKKRR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=46, Percent_Identity=86.9565217391304, Blast_Score=87, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_KLEP3 (B5Y0Q3)

Other databases:

- EMBL:   CP000964
- RefSeq:   YP_002240044.1
- ProteinModelPortal:   B5Y0Q3
- SMR:   B5Y0Q3
- GeneID:   6936353
- GenomeReviews:   CP000964_GR
- KEGG:   kpe:KPK_4243
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 5466; Mature: 5466

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVVNSLRSAKQRHPDCQLVKRKGRLYVICKSNPRFKAVQGRKKRR
CHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQVVNSLRSAKQRHPDCQLVKRKGRLYVICKSNPRFKAVQGRKKRR
CHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA