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The map label for this gene is ydiM [H]

Identifier: 238893050

GI number: 238893050

Start: 871348

End: 872562

Strand: Reverse

Name: ydiM [H]

Synonym: KP1_0889

Alternate gene names: 238893050

Gene position: 872562-871348 (Counterclockwise)

Preceding gene: 238893051

Following gene: 238893049

Centisome position: 16.62

GC content: 54.57

Gene sequence:

>1215_bases
ATGAAAAATAAATACATCCCTACTGCGGCAGGGCTGTACCTCAACTACCTGATCCACGGTATGGGGGTGCTGTTAATCAC
CCTCAACATGGCCCATCTTCAGGAACAGTGGGGAACGGACGCGGCTGGCGTATCGGTGGTGATCTCCTCGTTAGGTATCG
GCAAACTGGCAACCATCGTGACCGGCTTCCTGTCGGATCGCTTCGGTCGCAAGCCCTTTATCTATCTTGGGATCCTGAGT
TACCTGATCTTTTTCGTCGGCATCCTGCTGACCAAAAATATCTATCTGGCTTACGTGTTCGGCATTATGGCGGGCCTGGC
GAACAGCTTCCTCGACTCCGGTACCTATCCGGCGCTGATGGAATCTTTCCCGCACTCTGCCAGCCGGGCCAACGTGCTGA
TCAAAGCCTTCGTCTCTGCAGGGCAGTTCCTGTTGCCGTTCATTATCAGCTTCCTGATATGGGCAAATCTGTGGTTCGGC
TGGTCGTTCGTGATTGCGGCAGCACTCTTTGTACTGAGCGGGATTTATCTGCTTAAAATGCCGTTCCCTGACAGCCAGGC
AGCGAAAAAAGAGGAAGCCCCTACGGCACAGGCGGAAACAGCCGTCCGGCCACAGGCTAATAAGCTGGATATGGTGATCT
TCACCCTGTACGGTTATATCGGCATGGCGACCTTCTATCTGGTCAGCCAATGGCTGGCGCAGTACGGCCAGTTCGTCGTC
GGCCTGCCCTATGCCTCGGCGATTAAACTGCTTAGCATCTATACCGTCGGCTCGCTGGTCTGCGTCTTTGTAACTGCCGC
CTTCGTCAAAGAGGTGTTTAGCTCGGCCATTGCGATGATTATTTATACTGGCCTGTCGATGATTTCGCTGCTGTTGGTGT
GCCTGTTCCCGACGCCGATGATGGTAACCGGCTTTGCTTTTGTCATCGGCTTTGCCGCCGCTGGCGGAGTGCTGCAGCTG
GGTGCGACAATCATGGCGATGAGCTTCCCGAACGGAAAAGGCAAAGCAACCGGCATCTTCTACACTGCCGGCAGTATCGC
CAGCTTCACGATCCCGTTGATCACCGCAAAGCTTTCGCAGATCAGTATTGCCAGCATTATGTGGTTTGATTTTCTGATCG
CCGTTATCGGCTTTGTGATCGCCCTGTACATCGGCTATCGTCAACTGCAGGCTCGGGCGGCGCAAAAAGTGTCACGCACC
GCAGTCACCGCCTGA

Upstream 100 bases:

>100_bases
GGGATGATGCTGTGGCAAGGCGCGCGCGCGTTCGAAATCTGGACGGGCAAACAGATGCCGGTTGATTACATCAAGAGCAT
TCTGTTCTAAGAGGCGAATG

Downstream 100 bases:

>100_bases
AGTACAACGCGAAAAATAATGGATACCTACATGACAAATGCAGTAACCGTAAAGAACATCACCTTCCAGGAAGGGGAAAC
CCTCATTTGTGTACCGCTGA

Product: putative MFS-family transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKNKYIPTAAGLYLNYLIHGMGVLLITLNMAHLQEQWGTDAAGVSVVISSLGIGKLATIVTGFLSDRFGRKPFIYLGILS
YLIFFVGILLTKNIYLAYVFGIMAGLANSFLDSGTYPALMESFPHSASRANVLIKAFVSAGQFLLPFIISFLIWANLWFG
WSFVIAAALFVLSGIYLLKMPFPDSQAAKKEEAPTAQAETAVRPQANKLDMVIFTLYGYIGMATFYLVSQWLAQYGQFVV
GLPYASAIKLLSIYTVGSLVCVFVTAAFVKEVFSSAIAMIIYTGLSMISLLLVCLFPTPMMVTGFAFVIGFAAAGGVLQL
GATIMAMSFPNGKGKATGIFYTAGSIASFTIPLITAKLSQISIASIMWFDFLIAVIGFVIALYIGYRQLQARAAQKVSRT
AVTA

Sequences:

>Translated_404_residues
MKNKYIPTAAGLYLNYLIHGMGVLLITLNMAHLQEQWGTDAAGVSVVISSLGIGKLATIVTGFLSDRFGRKPFIYLGILS
YLIFFVGILLTKNIYLAYVFGIMAGLANSFLDSGTYPALMESFPHSASRANVLIKAFVSAGQFLLPFIISFLIWANLWFG
WSFVIAAALFVLSGIYLLKMPFPDSQAAKKEEAPTAQAETAVRPQANKLDMVIFTLYGYIGMATFYLVSQWLAQYGQFVV
GLPYASAIKLLSIYTVGSLVCVFVTAAFVKEVFSSAIAMIIYTGLSMISLLLVCLFPTPMMVTGFAFVIGFAAAGGVLQL
GATIMAMSFPNGKGKATGIFYTAGSIASFTIPLITAKLSQISIASIMWFDFLIAVIGFVIALYIGYRQLQARAAQKVSRT
AVTA
>Mature_404_residues
MKNKYIPTAAGLYLNYLIHGMGVLLITLNMAHLQEQWGTDAAGVSVVISSLGIGKLATIVTGFLSDRFGRKPFIYLGILS
YLIFFVGILLTKNIYLAYVFGIMAGLANSFLDSGTYPALMESFPHSASRANVLIKAFVSAGQFLLPFIISFLIWANLWFG
WSFVIAAALFVLSGIYLLKMPFPDSQAAKKEEAPTAQAETAVRPQANKLDMVIFTLYGYIGMATFYLVSQWLAQYGQFVV
GLPYASAIKLLSIYTVGSLVCVFVTAAFVKEVFSSAIAMIIYTGLSMISLLLVCLFPTPMMVTGFAFVIGFAAAGGVLQL
GATIMAMSFPNGKGKATGIFYTAGSIASFTIPLITAKLSQISIASIMWFDFLIAVIGFVIALYIGYRQLQARAAQKVSRT
AVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=401, Percent_Identity=59.1022443890274, Blast_Score=472, Evalue=1e-134,
Organism=Escherichia coli, GI226510946, Length=379, Percent_Identity=38.7862796833773, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43643; Mature: 43643

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]