| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is slt [H]
Identifier: 238892978
GI number: 238892978
Start: 786724
End: 788685
Strand: Direct
Name: slt [H]
Synonym: KP1_0809
Alternate gene names: 238892978
Gene position: 786724-788685 (Clockwise)
Preceding gene: 238892976
Following gene: 238892979
Centisome position: 14.99
GC content: 61.01
Gene sequence:
>1962_bases ATGCACCGGAAAGAGGAAGAGCTTGTGGAAAAAGCCAAAAAAATGGCGTGGCATCTTTTGGCTGCCAGCGTTGGTTTGTT GACGTTGAGTCAGCTGGCGCATGCGGATTCACTGGATGAACAGCGCAGCCGCTACGCACAAATTAAGCAGGCGTGGGATA ACCGGCAGATGGATGTAGTCGACCAGCTGATGCCCACGTTAAGCACCTATCCCCTGTATCCCTATTTGCAGTACCGACAG ATCACCGACGATCTGATGAACCAGCCGGCGCTGGTGGTGAAAAACTTTATTGACGCCAATCCGACGCTGCCCCCTGCGCG TTCATTACGTTCGCGCTTCGTGAATGAACTGGCCCGGCGCAGCGACTGGCGCGGCTTGCTGGCGTTTAGCCCGGATAAGC CGACCAGCACCGAGGCGCAGTGCAACTATTACTACGCCAAGCTGAGCGTGGGGCAGTCGCAGGAGGCCTGGAGCGGGGCG AAAGAGCTGTGGCTGACGGGCAAGAATCAGCCCGGCGCCTGTGAACCGCTGTTCAGCGCCTGGCGCGACTCCGGTCAGCA GGATCCGCTGGCCTATCTCGAACGGATCCGCCTGGCGATGAAGGCCGGCAATATCGGGCTGGTGAAATCGCTGGCCCAGC AAATGCCCGCCAACTACCAGAGCATCGCCAGCGCCGTGGTCGCCCTGGCTAACGATCCAAACAGCGTCCTCACCTTCGCC CGCACCACCGGGGCGACGGACTTTACCCGTCAGATGGCCGCCGTCGCCTTCGCCAGCGTCGCCCGCCAGGACGTGGAAAA TGCCCGCCTGATGATCCCTTCGCTGGTACAGGCTCAGCAGCTCAATGAGGATCAGACCCAGGAACTGCGCGATATTGTCG CCTGGCGCCTGATGGGTAGCGATGTAACCGAAGAGCAGGCCATCTGGCGCGATGACGCAATCATGCGTTCGCAGTCCACG CCGCTGGTGGAGCGGCGGGTACGGATGGCGTTGGGGACGGGCGATCGCCATGGCCTCAACACCTGGCTGGCGCGCCTGCC GATGGAGGCGAAAGAGAAAGACGAATGGCGCTACTGGCAGGCGGATCTGCTGCTGGAGCGCGGCAGGGATGAGGAGGCGC AGGCGATCCTTCGCTCGTTGATGCAACAGCGAGGCTTCTACCCGATGGTCGCCGCGCAGCGTCTTGGCGAGGAGTATACC TTCCGCATCGATAAAGCCTCGGGCACCATCGATCCGGCGCTGGCCTCCGGGCCGGAGATGGCGCGGGTACGTGAGCTGAT GTACTGGAATATGGATAACACCGCGCGCACCGAATGGGCCAACCTGGTCACTAGTCGCGTCAAATCCCAGCAGGCGCAGC TGGCGCGCTATGCCTTCGATCAGCACTGGTGGGATCTGAGCGTGCAGGCGACGATCGCCGGTAAGCTGTGGGATCAGCTG GAAGAACGTTTCCCGCTGGCCTATAACGACCTGTTTGCCCGCTATGTTAGCGGCAAAGATATTCCGCAGAGCTACGCGAT GGCGATTGCCCGTCAGGAGAGCGCCTGGAACCCGAAAGTGCGCTCGCCGGTCGGCGCCAGCGGACTGATGCAGATTATGC CGGGCACCGCGACGCATACCGTCAGTATGTTCAGCATTCCCGGCTACAGCGGCCCGTCGCAGCTGTTGGATCCGGAAACC AACATCAATATCGGCACCAGCTATCTGCAGTACGTTTATCAGCAGTTCGGCAATAACCGTATCTACGCCTCAGCGGCCTA TAACGCCGGGCCGGGCCGGGTACGCAGCTGGCAGGGGAACAGCGCCGGACGGATCGACGCCGTGGCGTTTGTCGAGAGTA TTCCGTTTTCGGAAACCCGCGGCTACGTGAAGAATGTCCTCTCCTATGACGCCTACTACCGCTACTTTATGGGGCAGCAG GATAAGATCCTCAGCGATGCGGAGTGGCGCCAGCGTTACTGA
Upstream 100 bases:
>100_bases AAAATGTCCAGGACATGGCGCGTTTAGCGTTGTCTGATTAGCATAAGTAAAGCCGCCTGCCGAACCGGCAGGGGTTTTTA AGCGGCACGATGCTGCGAAA
Downstream 100 bases:
>100_bases TCGCCGGGAAGTATGTTATGCTTTGTACTCGTTGAAGAGTACATTCGACGGGCAGCGTAAGCTGCCCGTCTCAATATGGT GGCGCGATATGACCCAACAA
Product: lytic murein transglycosylase
Products: 1,6-Anhydrobond [C]
Alternate protein names: Exomuramidase; Peptidoglycan lytic exotransglycosylase; Slt70 [H]
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MHRKEEELVEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRSRYAQIKQAWDNRQMDVVDQLMPTLSTYPLYPYLQYRQ ITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARRSDWRGLLAFSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGA KELWLTGKNQPGACEPLFSAWRDSGQQDPLAYLERIRLAMKAGNIGLVKSLAQQMPANYQSIASAVVALANDPNSVLTFA RTTGATDFTRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGSDVTEEQAIWRDDAIMRSQST PLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQADLLLERGRDEEAQAILRSLMQQRGFYPMVAAQRLGEEYT FRIDKASGTIDPALASGPEMARVRELMYWNMDNTARTEWANLVTSRVKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQL EERFPLAYNDLFARYVSGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHTVSMFSIPGYSGPSQLLDPET NINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRSWQGNSAGRIDAVAFVESIPFSETRGYVKNVLSYDAYYRYFMGQQ DKILSDAEWRQRY
Sequences:
>Translated_653_residues MHRKEEELVEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRSRYAQIKQAWDNRQMDVVDQLMPTLSTYPLYPYLQYRQ ITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARRSDWRGLLAFSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGA KELWLTGKNQPGACEPLFSAWRDSGQQDPLAYLERIRLAMKAGNIGLVKSLAQQMPANYQSIASAVVALANDPNSVLTFA RTTGATDFTRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGSDVTEEQAIWRDDAIMRSQST PLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQADLLLERGRDEEAQAILRSLMQQRGFYPMVAAQRLGEEYT FRIDKASGTIDPALASGPEMARVRELMYWNMDNTARTEWANLVTSRVKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQL EERFPLAYNDLFARYVSGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHTVSMFSIPGYSGPSQLLDPET NINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRSWQGNSAGRIDAVAFVESIPFSETRGYVKNVLSYDAYYRYFMGQQ DKILSDAEWRQRY >Mature_653_residues MHRKEEELVEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRSRYAQIKQAWDNRQMDVVDQLMPTLSTYPLYPYLQYRQ ITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARRSDWRGLLAFSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGA KELWLTGKNQPGACEPLFSAWRDSGQQDPLAYLERIRLAMKAGNIGLVKSLAQQMPANYQSIASAVVALANDPNSVLTFA RTTGATDFTRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGSDVTEEQAIWRDDAIMRSQST PLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQADLLLERGRDEEAQAILRSLMQQRGFYPMVAAQRLGEEYT FRIDKASGTIDPALASGPEMARVRELMYWNMDNTARTEWANLVTSRVKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQL EERFPLAYNDLFARYVSGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHTVSMFSIPGYSGPSQLLDPET NINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRSWQGNSAGRIDAVAFVESIPFSETRGYVKNVLSYDAYYRYFMGQQ DKILSDAEWRQRY
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Periplasm. Note=Tightly associated with the murein sacculus (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082441, Length=645, Percent_Identity=82.9457364341085, Blast_Score=1128, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016026 - InterPro: IPR008258 - InterPro: IPR012289 - InterPro: IPR008939 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 74150; Mature: 74150
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00922 TRANSGLYCOSYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKEEELVEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRSRYAQIKQAWDNRQMDVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH DQLMPTLSTYPLYPYLQYRQITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC SDWRGLLAFSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGAKELWLTGKNQPGACEPLFSA CCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHCCCHHHEEECCCCCCCCHHHHHH WRDSGQQDPLAYLERIRLAMKAGNIGLVKSLAQQMPANYQSIASAVVALANDPNSVLTFA HHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHEEEH RTTGATDFTRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC DVTEEQAIWRDDAIMRSQSTPLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQ CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHH ADLLLERGRDEEAQAILRSLMQQRGFYPMVAAQRLGEEYTFRIDKASGTIDPALASGPEM HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCHH ARVRELMYWNMDNTARTEWANLVTSRVKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH EERFPLAYNDLFARYVSGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHT HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHE VSMFSIPGYSGPSQLLDPETNINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRSWQGN EEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC SAGRIDAVAFVESIPFSETRGYVKNVLSYDAYYRYFMGQQDKILSDAEWRQRY CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure MHRKEEELVEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRSRYAQIKQAWDNRQMDVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH DQLMPTLSTYPLYPYLQYRQITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARR HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC SDWRGLLAFSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGAKELWLTGKNQPGACEPLFSA CCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHCCCHHHEEECCCCCCCCHHHHHH WRDSGQQDPLAYLERIRLAMKAGNIGLVKSLAQQMPANYQSIASAVVALANDPNSVLTFA HHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHEEEH RTTGATDFTRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGS HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC DVTEEQAIWRDDAIMRSQSTPLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQ CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHH ADLLLERGRDEEAQAILRSLMQQRGFYPMVAAQRLGEEYTFRIDKASGTIDPALASGPEM HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCHH ARVRELMYWNMDNTARTEWANLVTSRVKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHH EERFPLAYNDLFARYVSGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHT HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCHHE VSMFSIPGYSGPSQLLDPETNINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRSWQGN EEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC SAGRIDAVAFVESIPFSETRGYVKNVLSYDAYYRYFMGQQDKILSDAEWRQRY CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]