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The map label for this gene is smp [H]

Identifier: 238892973

GI number: 238892973

Start: 780389

End: 781036

Strand: Reverse

Name: smp [H]

Synonym: KP1_0803

Alternate gene names: 238892973

Gene position: 781036-780389 (Counterclockwise)

Preceding gene: 238892977

Following gene: 238892972

Centisome position: 14.88

GC content: 58.64

Gene sequence:

>648_bases
ATGGTTCGCGCAAAACTGAAATTCCGGCTGCATCGTGCGGTCATTGTTCTTATCTGTCTCGCCCTGCTCGTCGCGCTGAT
GCAGGGCGCTTCGTGGTTCAGTCAGAACAGTCAGAAACAACGCAATCCGCAGCTGGAAGAGCTGGCCCGCACGCTGGCGC
AGCAGGTGGTGCTGAATCTCGCGCCGCTGATGCGCAGCGAGACGCCTGACGAGAAGCGCATCAATCAGCTGTTGACCCAG
CTAACCCATAACAGCCGCGTCCTGGACGCCGGGGTATATGACGAACAGGGCGACCTGGTGGCGCGCTCTGGCGAAAGCGT
CGAGGTTCGCGACCGGCTGGCGCTGGATGGTAAAAAAGCCGGCGGCTACTTCAACCAGCAGATTGTCGAACCGGTGCCAG
GAAAAAACGGCCCGCTGGGCTACCTGCGTCTGACCCTCGATACTCATACCCTGGCGACCGAGGCGAAGCAGGTGGATAAT
ACCACCAATATCTTACGCCTGATGCTGTTACTGTCCCTGGCTATCGGCGTGGTACTGACCCGCACGCTGCTGCAGGGCAA
ACGCACCCGCTGGCAGCAATCGCCTTTCCTGCTCACCGCCAACAAGCCGGTTGAGGATGAAGACGATGAAAAGAAAGGAA
ATCTATAA

Upstream 100 bases:

>100_bases
GCTCCACATCTCTTCATTCAGGCGAGGAAAATAACGCATGAGGCTACCTTGTAACCAGCGCTTCTGGCAACATTAAGCTG
CAAATTTTCAAAGGTGGAAT

Downstream 100 bases:

>100_bases
TGTCCACATTGCGCCTCCTGCTCTCTGACTCTTACGACCCGTGGTTCAACCTGGCGGTCGAGGAGTGCATTTTCCGCCAG
ATGCCCGCCACCCAGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MVRAKLKFRLHRAVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNLAPLMRSETPDEKRINQLLTQ
LTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKAGGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL

Sequences:

>Translated_215_residues
MVRAKLKFRLHRAVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNLAPLMRSETPDEKRINQLLTQ
LTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKAGGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL
>Mature_215_residues
MVRAKLKFRLHRAVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNLAPLMRSETPDEKRINQLLTQ
LTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKAGGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDN
TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family [H]

Homologues:

Organism=Escherichia coli, GI1790847, Length=204, Percent_Identity=88.7254901960784, Blast_Score=355, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019305 [H]

Pfam domain/function: PF10144 SMP_2 [H]

EC number: NA

Molecular weight: Translated: 24072; Mature: 24072

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRAKLKFRLHRAVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH
APLMRSETPDEKRINQLLTQLTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKA
HHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCEEHHHHHHCCCCCC
GGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDNTTNILRLMLLLSLAIGVVLT
CCCHHHHHHCCCCCCCCCEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRAKLKFRLHRAVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH
APLMRSETPDEKRINQLLTQLTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKA
HHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCEEHHHHHHCCCCCC
GGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDNTTNILRLMLLLSLAIGVVLT
CCCHHHHHHCCCCCCCCCEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]