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The map label for this gene is yibH [H]

Identifier: 238892892

GI number: 238892892

Start: 702741

End: 703805

Strand: Direct

Name: yibH [H]

Synonym: KP1_0713

Alternate gene names: 238892892

Gene position: 702741-703805 (Clockwise)

Preceding gene: 238892891

Following gene: 238892893

Centisome position: 13.39

GC content: 61.97

Gene sequence:

>1065_bases
ATGACGCCTGAACAAAAATTTGCCCGCTGGGTACGGGTGAGTATTGCCGCTTTTCTGGGAATATTCGCCTGGTTTATCGT
TGCCGATATCTGGATCCCGCTGACGCCGGACTCCACCGTCATGCGCGTGGTGACCCCGGTTTCGTCGCGGGTCTCCGGCT
ATGTCTCGCACGTCTACGTGCACAACAACAGCCAGGTGAAAAAGGGCGACCTGCTGTATGAGCTCGACCCAACGCCATTC
ATTAATAAAGTTGAAGCGGCGCAGATCGCCCTCGAGCAGGCGAAACTGAGCAACCAGCAGCTGGACGCGCAAATCGCCGC
CGCCCGCGCCAACCTGCGCACCGCGCAGTACACCGCGCGTAACGATAAGGTCACGCTCGATCGCTACCAGCGCTTGAGTA
CGATGCAGAACGTCTCGCAGTCCGACCTCGATAAGGTGCGAACCACCTGGCAGACCAGCGAGCAGTCGGTCTCGGCGCTG
AACGCGCAGATCCAGAACCTGCTGATCCAGCGCGGCGAGCGCGACGATAAGCGCAACGTCACCCTGCAGAAATACCGTAA
TGCGCTGGAGGAGGCGCAGCTGAACCTGGCCTGGACCAAAGTGCGTGCGGAAACTGACGGCATGGTCAGCAACCTGCAGC
TGAACCCGGGGATCTACGCCACCGCGGCGACGGCTGTGCTGGCATTGGTTAACAACAACACTGACATCGTCGCCGACTTC
CGCGAAAAAAGCCTGCGCCACACCGCGGTGAATACCGATGCGGCGGTGGTCTTTGACGCCCTGCCGGGTCAAGTCTTCCC
GGCGCACGTGACCAGCAGCGACGCCGGGATTCTGGCGGGACAGGAGGCGGTGAACGGTCAGCTGTCGCAGCCGGAGCAGT
CCACCCGCTGGGTGCGCGACGCCCAGCGGATGCGCATTCACGTCGCGCTGGATCAGCCGCTGGACAAACCGCTGCCGACC
GGCGCTCGCGCCACGGTGCAGCTGTACAATAGCGAGGGACCTTTCGCCCGCACCTTCGCCGGCCTGCAGATCCACCTGGT
GAGCTGGTTGCACTATGTCTATTAA

Upstream 100 bases:

>100_bases
CCCGGAGGCCGATCTCGCCACCTTCAGCGCCACGTTAAATCAAATCGCCTGCCGTTTGCGGAATATCCGCGAAGAAGATA
ACAAGATCTAACACACTATG

Downstream 100 bases:

>100_bases
TACCCTGGCGCATGTCTTTACCCCGCACGGCAATATCGTCTACACGGCGAATGATTTTCGCCAGACGGTGCGTATCGCCG
TGGCCGGGACCATTGCGCTC

Product: putative secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTPEQKFARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVYVHNNSQVKKGDLLYELDPTPF
INKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSAL
NAQIQNLLIQRGERDDKRNVTLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLNPGIYATAATAVLALVNNNTDIVADF
REKSLRHTAVNTDAAVVFDALPGQVFPAHVTSSDAGILAGQEAVNGQLSQPEQSTRWVRDAQRMRIHVALDQPLDKPLPT
GARATVQLYNSEGPFARTFAGLQIHLVSWLHYVY

Sequences:

>Translated_354_residues
MTPEQKFARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVYVHNNSQVKKGDLLYELDPTPF
INKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSAL
NAQIQNLLIQRGERDDKRNVTLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLNPGIYATAATAVLALVNNNTDIVADF
REKSLRHTAVNTDAAVVFDALPGQVFPAHVTSSDAGILAGQEAVNGQLSQPEQSTRWVRDAQRMRIHVALDQPLDKPLPT
GARATVQLYNSEGPFARTFAGLQIHLVSWLHYVY
>Mature_353_residues
TPEQKFARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVYVHNNSQVKKGDLLYELDPTPFI
NKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALN
AQIQNLLIQRGERDDKRNVTLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLNPGIYATAATAVLALVNNNTDIVADFR
EKSLRHTAVNTDAAVVFDALPGQVFPAHVTSSDAGILAGQEAVNGQLSQPEQSTRWVRDAQRMRIHVALDQPLDKPLPTG
ARATVQLYNSEGPFARTFAGLQIHLVSWLHYVY

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790024, Length=357, Percent_Identity=29.6918767507003, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1790012, Length=360, Percent_Identity=28.6111111111111, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1790519, Length=295, Percent_Identity=30.5084745762712, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789637, Length=324, Percent_Identity=25, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081951, Length=298, Percent_Identity=27.1812080536913, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39467; Mature: 39336

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEQKFARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVYV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHEEEEEEE
HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTAR
ECCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECC
NDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNV
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
TLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLNPGIYATAATAVLALVNNNTDIVADF
EHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEHH
REKSLRHTAVNTDAAVVFDALPGQVFPAHVTSSDAGILAGQEAVNGQLSQPEQSTRWVRD
HHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCEEECCHHHCCCCCCCHHHHHHHHH
AQRMRIHVALDQPLDKPLPTGARATVQLYNSEGPFARTFAGLQIHLVSWLHYVY
HHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHHHHHHHHHC
>Mature Secondary Structure 
TPEQKFARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHEEEEEEE
HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTAR
ECCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECC
NDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNV
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
TLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLNPGIYATAATAVLALVNNNTDIVADF
EHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEHH
REKSLRHTAVNTDAAVVFDALPGQVFPAHVTSSDAGILAGQEAVNGQLSQPEQSTRWVRD
HHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCEEECCHHHCCCCCCCHHHHHHHHH
AQRMRIHVALDQPLDKPLPTGARATVQLYNSEGPFARTFAGLQIHLVSWLHYVY
HHHEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]