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The map label for this gene is slyA [H]

Identifier: 238892891

GI number: 238892891

Start: 702213

End: 702731

Strand: Direct

Name: slyA [H]

Synonym: KP1_0711

Alternate gene names: 238892891

Gene position: 702213-702731 (Clockwise)

Preceding gene: 238892890

Following gene: 238892892

Centisome position: 13.38

GC content: 55.49

Gene sequence:

>519_bases
TTGATACTTACCCTGATAAGTATTATTTTCTTCTCAATAATGAGAGGAAGACCCGTGACTGAAGACGGACTGTTTGCCCG
CCGCCCGCTGGGGATGCGGATGGCTATGGTGGTGCGCCAGTGGCGCGCCATTATTGACTCCGCTATCACCGATACCGGAC
TCACCCAGTCCAGCTGGACGGTGCTGATGCAACTGCATCAGCTGGGAGACAACGTCTCGGTCAGCGAACTGGCGGAGGTG
CAGGGCATTGAACTGCCGCCGCTAATGCGCACCCTCTCATTACTGGAAAAGCAGGGCTATCTGGTGCGTTCCACATCGCC
ATATGACAAACGCATTCGCCTGCTGACGCTGACCGCTGAGGGGCGGGCTATTCTGGAAAAACTGAGCTGCGTGATCGAGA
CCTATCAGGAGCGCGTAACCCAGACCATCCCGGAGGCCGATCTCGCCACCTTCAGCGCCACGTTAAATCAAATCGCCTGC
CGTTTGCGGAATATCCGCGAAGAAGATAACAAGATCTAA

Upstream 100 bases:

>100_bases
TTTTTACAGGCAAACCTTCTTCATTATCCCGGTGAGCGCAAAGTGCCGCCGGGATACATTCACGAAATTTATCAATTGAT
GCGGCACGACCTTCCGTTTC

Downstream 100 bases:

>100_bases
CACACTATGATGACGCCTGAACAAAAATTTGCCCGCTGGGTACGGGTGAGTATTGCCGCTTTTCTGGGAATATTCGCCTG
GTTTATCGTTGCCGATATCT

Product: putative MarR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MILTLISIIFFSIMRGRPVTEDGLFARRPLGMRMAMVVRQWRAIIDSAITDTGLTQSSWTVLMQLHQLGDNVSVSELAEV
QGIELPPLMRTLSLLEKQGYLVRSTSPYDKRIRLLTLTAEGRAILEKLSCVIETYQERVTQTIPEADLATFSATLNQIAC
RLRNIREEDNKI

Sequences:

>Translated_172_residues
MILTLISIIFFSIMRGRPVTEDGLFARRPLGMRMAMVVRQWRAIIDSAITDTGLTQSSWTVLMQLHQLGDNVSVSELAEV
QGIELPPLMRTLSLLEKQGYLVRSTSPYDKRIRLLTLTAEGRAILEKLSCVIETYQERVTQTIPEADLATFSATLNQIAC
RLRNIREEDNKI
>Mature_172_residues
MILTLISIIFFSIMRGRPVTEDGLFARRPLGMRMAMVVRQWRAIIDSAITDTGLTQSSWTVLMQLHQLGDNVSVSELAEV
QGIELPPLMRTLSLLEKQGYLVRSTSPYDKRIRLLTLTAEGRAILEKLSCVIETYQERVTQTIPEADLATFSATLNQIAC
RLRNIREEDNKI

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=120, Percent_Identity=35.8333333333333, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19494; Mature: 19494

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTLISIIFFSIMRGRPVTEDGLFARRPLGMRMAMVVRQWRAIIDSAITDTGLTQSSWT
CHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VLMQLHQLGDNVSVSELAEVQGIELPPLMRTLSLLEKQGYLVRSTSPYDKRIRLLTLTAE
HHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCHHHEEEEEEEECC
GRAILEKLSCVIETYQERVTQTIPEADLATFSATLNQIACRLRNIREEDNKI
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILTLISIIFFSIMRGRPVTEDGLFARRPLGMRMAMVVRQWRAIIDSAITDTGLTQSSWT
CHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VLMQLHQLGDNVSVSELAEVQGIELPPLMRTLSLLEKQGYLVRSTSPYDKRIRLLTLTAE
HHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCHHHEEEEEEEECC
GRAILEKLSCVIETYQERVTQTIPEADLATFSATLNQIACRLRNIREEDNKI
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA