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The map label for this gene is yhhJ [H]

Identifier: 238892878

GI number: 238892878

Start: 686863

End: 688071

Strand: Reverse

Name: yhhJ [H]

Synonym: KP1_0698

Alternate gene names: 238892878

Gene position: 688071-686863 (Counterclockwise)

Preceding gene: 238892879

Following gene: 238892875

Centisome position: 13.11

GC content: 57.07

Gene sequence:

>1209_bases
GTGGGGCTCATTCATTCCGCTACTGATTGCGGTGCCGCTGGTGCTCGGGTTGAGCGTGCTGCTGCTGAAGAAACAGGAGG
GATGATGCGCGGATTACGCAATATTTATAATCTTGGCGTCAAAGAGCTGCGCAGCCTGCTCGGTGATAAAGCGATGCTGG
CGCTGATCGTGTTTGCGTTTACCGTGTCGGTGTACTCCTCGGCCACGGTGATGCCCGGTTCGCTGCACCTGGCGCCGATC
GCGGTTGCTGATATGGATAAATCACAGCTCTCCTCACGCATTATTAACGCTTTTTACCGTCCCTGGTTTCTTGAGCCGGA
GCTGATCACCGCTGATGAGATGGACGCCGGGCTGGATGCCGGGCGCTACACGTTCGCCATCAACATCCCGCCTAACTTCC
AGCGCGATGTACTGGCCGGTCGGCAGCCGGAAATCCAGGTCAACGTCGACGCCACACGCATGAGCCAGGCCTTTACCGGC
AACGGTTACATCCAGAATATTATCACCGGCGAAGTAAACAGTTTTATCGCCCGCTATCGGGATAACAGCGTGCTGCCGGT
AGAGCTGGCGGTAAGGATGCGTTTTAATCCTAACCTTGAGCAGGAGCGCTTTGGCGCGGTGATGGCGATCATCAACAATA
TCACCATGCTGGCCATTGTCCTCACCGGTTCGGCGCTGATCCGCGAGCGGGAACATGGCACCATTGAGCATCTGCTGGTG
ATGCCGGTCACGCCGTTTGAAATTATGCTGGCCAAGATCTGGTCGATGGGTCTGGTGGTGCTGGTGGTCTCCGGGCTGTC
GCTGGTGCTGATGGTGCAGGGGATTTTGCAGGTACCCATTGAGGGATCGGTTCCACTGTTTATGCTGGGGGTGGCGCTCA
GCCTGTTCGCCACGACCTCGATCGGCATTTTTATGGGCACCCTCGCCCGCTCGATGCCGCAGCTGGGGCTGCTGATGATC
CTGGTCTTACTTCCGCTGCAGATGCTCTCCGGCGGATCCACGCCGCGAGAAAGTATGCCGCAGCTGGTACAGGATATTAT
GTTGACCATGCCGACCACCCACTTCGTCAGCCTGGCGCAGGCGATATTGTATCGAGGCGCCAGCTTCGCCATCGTCTGGC
CGCAGTTCTTAACCTTGCTGGCTATCGGCGGAGTGTTCTTTACTATCGCGTTGCTGCGTTTTCGTAAGACTATCGGTGAG
ATGGCATAA

Upstream 100 bases:

>100_bases
TGGAAGGTCCCGGGCGCTGGATTGGGCAAATCTACCCGACCAGCCACTTCCTGACTATCGCCCGCGGGACCTTTTCGAAA
GCGCTGAATATTAGCGATTT

Downstream 100 bases:

>100_bases
AGGCTTAAGAAGGGCCGTCGACTTACGGCGGCCGAATGGTTTATTTATGGCGATTCATAAAGCGACGTAAACCCCAGGTG
AAGGCCATCGCCATACTGAA

Product: antibiotic transport system permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MGLIHSATDCGAAGARVERAAAEETGGMMRGLRNIYNLGVKELRSLLGDKAMLALIVFAFTVSVYSSATVMPGSLHLAPI
AVADMDKSQLSSRIINAFYRPWFLEPELITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPEIQVNVDATRMSQAFTG
NGYIQNIITGEVNSFIARYRDNSVLPVELAVRMRFNPNLEQERFGAVMAIINNITMLAIVLTGSALIREREHGTIEHLLV
MPVTPFEIMLAKIWSMGLVVLVVSGLSLVLMVQGILQVPIEGSVPLFMLGVALSLFATTSIGIFMGTLARSMPQLGLLMI
LVLLPLQMLSGGSTPRESMPQLVQDIMLTMPTTHFVSLAQAILYRGASFAIVWPQFLTLLAIGGVFFTIALLRFRKTIGE
MA

Sequences:

>Translated_402_residues
MGLIHSATDCGAAGARVERAAAEETGGMMRGLRNIYNLGVKELRSLLGDKAMLALIVFAFTVSVYSSATVMPGSLHLAPI
AVADMDKSQLSSRIINAFYRPWFLEPELITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPEIQVNVDATRMSQAFTG
NGYIQNIITGEVNSFIARYRDNSVLPVELAVRMRFNPNLEQERFGAVMAIINNITMLAIVLTGSALIREREHGTIEHLLV
MPVTPFEIMLAKIWSMGLVVLVVSGLSLVLMVQGILQVPIEGSVPLFMLGVALSLFATTSIGIFMGTLARSMPQLGLLMI
LVLLPLQMLSGGSTPRESMPQLVQDIMLTMPTTHFVSLAQAILYRGASFAIVWPQFLTLLAIGGVFFTIALLRFRKTIGE
MA
>Mature_401_residues
GLIHSATDCGAAGARVERAAAEETGGMMRGLRNIYNLGVKELRSLLGDKAMLALIVFAFTVSVYSSATVMPGSLHLAPIA
VADMDKSQLSSRIINAFYRPWFLEPELITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPEIQVNVDATRMSQAFTGN
GYIQNIITGEVNSFIARYRDNSVLPVELAVRMRFNPNLEQERFGAVMAIINNITMLAIVLTGSALIREREHGTIEHLLVM
PVTPFEIMLAKIWSMGLVVLVVSGLSLVLMVQGILQVPIEGSVPLFMLGVALSLFATTSIGIFMGTLARSMPQLGLLMIL
VLLPLQMLSGGSTPRESMPQLVQDIMLTMPTTHFVSLAQAILYRGASFAIVWPQFLTLLAIGGVFFTIALLRFRKTIGEM
A

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=374, Percent_Identity=88.5026737967914, Blast_Score=652, Evalue=0.0,
Organism=Escherichia coli, GI1787010, Length=374, Percent_Identity=25.1336898395722, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI48994943, Length=335, Percent_Identity=27.1641791044776, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787011, Length=354, Percent_Identity=25.9887005649718, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24582014, Length=309, Percent_Identity=21.3592233009709, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24582012, Length=309, Percent_Identity=21.3592233009709, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 43809; Mature: 43677

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIHSATDCGAAGARVERAAAEETGGMMRGLRNIYNLGVKELRSLLGDKAMLALIVFAF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHH
TVSVYSSATVMPGSLHLAPIAVADMDKSQLSSRIINAFYRPWFLEPELITADEMDAGLDA
HHHHHCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC
GRYTFAINIPPNFQRDVLAGRQPEIQVNVDATRMSQAFTGNGYIQNIITGEVNSFIARYR
CCEEEEEECCCCCCHHHHCCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
DNSVLPVELAVRMRFNPNLEQERFGAVMAIINNITMLAIVLTGSALIREREHGTIEHLLV
CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
MPVTPFEIMLAKIWSMGLVVLVVSGLSLVLMVQGILQVPIEGSVPLFMLGVALSLFATTS
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IGIFMGTLARSMPQLGLLMILVLLPLQMLSGGSTPRESMPQLVQDIMLTMPTTHFVSLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AILYRGASFAIVWPQFLTLLAIGGVFFTIALLRFRKTIGEMA
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GLIHSATDCGAAGARVERAAAEETGGMMRGLRNIYNLGVKELRSLLGDKAMLALIVFAF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHH
TVSVYSSATVMPGSLHLAPIAVADMDKSQLSSRIINAFYRPWFLEPELITADEMDAGLDA
HHHHHCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC
GRYTFAINIPPNFQRDVLAGRQPEIQVNVDATRMSQAFTGNGYIQNIITGEVNSFIARYR
CCEEEEEECCCCCCHHHHCCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
DNSVLPVELAVRMRFNPNLEQERFGAVMAIINNITMLAIVLTGSALIREREHGTIEHLLV
CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
MPVTPFEIMLAKIWSMGLVVLVVSGLSLVLMVQGILQVPIEGSVPLFMLGVALSLFATTS
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IGIFMGTLARSMPQLGLLMILVLLPLQMLSGGSTPRESMPQLVQDIMLTMPTTHFVSLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AILYRGASFAIVWPQFLTLLAIGGVFFTIALLRFRKTIGEMA
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]