Click here to switch to the map view.

The map label for this gene is cybC [H]

Identifier: 238892715

GI number: 238892715

Start: 503255

End: 503641

Strand: Direct

Name: cybC [H]

Synonym: KP1_0506

Alternate gene names: 238892715

Gene position: 503255-503641 (Clockwise)

Preceding gene: 238892714

Following gene: 238892716

Centisome position: 9.59

GC content: 57.36

Gene sequence:

>387_bases
ATGCGTAAAAAACTGTTAGCGATGCTGGCTGTCTCTGCTTTTGCGCTCGGTTCAGCGTCGGCCTTCGCCGACCTGGGCGA
AGACATGGACACTCTGGCAGAAAACCTGCAAGTGGTACAGAAGACCTCCGACGCCGGCGAGCTGAAAGCGGCGCTGAATA
AGATGCGTACCGCCGCGGTCGATGCTCAGAAAGAGACCCCGCCGAAGCTGGAAGGCAAAGCGGCCGACAGCGCTGAGATG
AAAGATTACCGTCACGGTCTGGATATTCTGATCGGCCAGATCGACGGTGCGCTGAAGCTGGCGAACGAAGGCAAGGTGAA
AGAGGCGCAGGCCGCCGCGGAGGAGTTTAAAACCACCCGCAACACCTATCATAAGAAGTACCGCTAA

Upstream 100 bases:

>100_bases
AACGCGCAGCAACATTCAGTGCGGTTCTGTGCTGCTGCCGGAGATGAAAATCGCCGGGCAATAACACCTGTTTGCTTAAA
TAATAAAAAGGAAGTGAGCA

Downstream 100 bases:

>100_bases
CCGTTCTTTTCGGGAGGCATTAGCCGATGCCTCCCACCTGAAAGCCTACCGATATCACATTTTTCCACTCTCTTTTTCCG
GCCTTTCCGCTGCCGCGGGC

Product: cytochrome b562

Products: reduced cytochrome b [C]

Alternate protein names: Cytochrome b-562 [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRKKLLAMLAVSAFALGSASAFADLGEDMDTLAENLQVVQKTSDAGELKAALNKMRTAAVDAQKETPPKLEGKAADSAEM
KDYRHGLDILIGQIDGALKLANEGKVKEAQAAAEEFKTTRNTYHKKYR

Sequences:

>Translated_128_residues
MRKKLLAMLAVSAFALGSASAFADLGEDMDTLAENLQVVQKTSDAGELKAALNKMRTAAVDAQKETPPKLEGKAADSAEM
KDYRHGLDILIGQIDGALKLANEGKVKEAQAAAEEFKTTRNTYHKKYR
>Mature_128_residues
MRKKLLAMLAVSAFALGSASAFADLGEDMDTLAENLQVVQKTSDAGELKAALNKMRTAAVDAQKETPPKLEGKAADSAEM
KDYRHGLDILIGQIDGALKLANEGKVKEAQAAAEEFKTTRNTYHKKYR

Specific function: Electron-transport protein of unknown function [H]

COG id: COG3783

COG function: function code C; Soluble cytochrome b562

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b562 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009155
- InterPro:   IPR010980 [H]

Pfam domain/function: PF07361 Cytochrom_B562 [H]

EC number: NA

Molecular weight: Translated: 13855; Mature: 13855

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLLAMLAVSAFALGSASAFADLGEDMDTLAENLQVVQKTSDAGELKAALNKMRTAAV
CHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DAQKETPPKLEGKAADSAEMKDYRHGLDILIGQIDGALKLANEGKVKEAQAAAEEFKTTR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH
NTYHKKYR
HHHHHCCC
>Mature Secondary Structure
MRKKLLAMLAVSAFALGSASAFADLGEDMDTLAENLQVVQKTSDAGELKAALNKMRTAAV
CHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DAQKETPPKLEGKAADSAEMKDYRHGLDILIGQIDGALKLANEGKVKEAQAAAEEFKTTR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHH
NTYHKKYR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cytochrome b oxidized; Electron [C]

Specific reaction: cytochrome b oxidized + 2 Electron = reduced cytochrome b [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]