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The map label for this gene is sgaU [H]

Identifier: 238892676

GI number: 238892676

Start: 464755

End: 465609

Strand: Direct

Name: sgaU [H]

Synonym: KP1_0464

Alternate gene names: 238892676

Gene position: 464755-465609 (Clockwise)

Preceding gene: 238892675

Following gene: 238892677

Centisome position: 8.85

GC content: 60.47

Gene sequence:

>855_bases
ATGTTGGCGAAATCCATTCCGCTCGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAGCGGCTAAAGCT
TGCAAAAGCGCTGGGCTTTGATTTCGTTGAGATGTCTCTCGATGAAACGGACGCCCGCCTTGCGCGGCTGGACTGGAGCC
CGGAGCAGCGTCTGGCGCTGGTCAAGGCGGTGGCTGAAACCGGCGTCCGGGTGCCGTCGATGTGCCTTAGCGCCCATCGC
CGTTTTCCGCTGGGTAGCGAAGACGACGCGGTGCGGCATCAGGGGCTGGAAATTATGCGAAAAGCTATTCAGCTGGCGCA
GGATGTGGGGATTCGGGTGATCCAGCTGGCAGGCTACGACGTCTATTACCAGCAGGCGAACGATGAGACGCGCCGCCGCT
TTCGTGACGGCCTGAAACAGAGCGTCGAGATGGCCAGCCGAGCCCAGGTAACCCTGGCGATGGAGATCATGGACTACCCG
CTGATGAACTCGATCAGTAAAGCGCTGGGCTATGCCCATTACCTGAATAATCCGTGGTTCCAGCTTTACCCGGATATCGG
CAATCTGTCGGCGTGGGATAACGACGTCCAGATGGAGCTGAAGGCGGGGAGCGGGCATATCGTGGCGGTACACGTCAAAG
ACACAAAGCCCGGCGTCTTTAAAAACGTGCCGTTCGGCGAAGGGGTGGTCGATTTTGAACGCTGCTTCGAAACGCTCAAG
CAGACCGGCTACTGCGGACCGTACCTGATTGAGATGTGGAGCGAAACCAGCGCTGACCCGCTGGCGGAGGTGGCGAAGGC
GCGTGACTGGGTGAAGGCGCGGATGGCCCGCGCGGGCCTGATGGAGGCGGCATAA

Upstream 100 bases:

>100_bases
CTTTATTGCCGGACGCAGCATCCGCGATGCTGCCTCGCCGGTGGAAGCGGCGCGCCAGTTTAAACGCTCTATCGCCCAGC
TGTGGGGTTAAGGAGCGACT

Downstream 100 bases:

>100_bases
TGCAACAGCTGAAACAGCAGGTGTTCGAGGCCAATATGGATCTGCCGCGCTACGGCCTGGTGACCTTTACCTGGGGTAAC
GTTAGCGCCATTGACCGGCA

Product: L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLAKSIPLGIYEKALPAGECWLERLKLAKALGFDFVEMSLDETDARLARLDWSPEQRLALVKAVAETGVRVPSMCLSAHR
RFPLGSEDDAVRHQGLEIMRKAIQLAQDVGIRVIQLAGYDVYYQQANDETRRRFRDGLKQSVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELKAGSGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QTGYCGPYLIEMWSETSADPLAEVAKARDWVKARMARAGLMEAA

Sequences:

>Translated_284_residues
MLAKSIPLGIYEKALPAGECWLERLKLAKALGFDFVEMSLDETDARLARLDWSPEQRLALVKAVAETGVRVPSMCLSAHR
RFPLGSEDDAVRHQGLEIMRKAIQLAQDVGIRVIQLAGYDVYYQQANDETRRRFRDGLKQSVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELKAGSGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QTGYCGPYLIEMWSETSADPLAEVAKARDWVKARMARAGLMEAA
>Mature_284_residues
MLAKSIPLGIYEKALPAGECWLERLKLAKALGFDFVEMSLDETDARLARLDWSPEQRLALVKAVAETGVRVPSMCLSAHR
RFPLGSEDDAVRHQGLEIMRKAIQLAQDVGIRVIQLAGYDVYYQQANDETRRRFRDGLKQSVEMASRAQVTLAMEIMDYP
LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELKAGSGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
QTGYCGPYLIEMWSETSADPLAEVAKARDWVKARMARAGLMEAA

Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI1790641, Length=284, Percent_Identity=90.4929577464789, Blast_Score=545, Evalue=1e-156,
Organism=Escherichia coli, GI87082294, Length=280, Percent_Identity=58.9285714285714, Blast_Score=336, Evalue=8e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.1.3.22 [H]

Molecular weight: Translated: 31876; Mature: 31876

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKSIPLGIYEKALPAGECWLERLKLAKALGFDFVEMSLDETDARLARLDWSPEQRLAL
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCHHHHHHH
VKAVAETGVRVPSMCLSAHRRFPLGSEDDAVRHQGLEIMRKAIQLAQDVGIRVIQLAGYD
HHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
VYYQQANDETRRRFRDGLKQSVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCE
QLYPDIGNLSAWDNDVQMELKAGSGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
EECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
QTGYCGPYLIEMWSETSADPLAEVAKARDWVKARMARAGLMEAA
HCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAKSIPLGIYEKALPAGECWLERLKLAKALGFDFVEMSLDETDARLARLDWSPEQRLAL
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCHHHHHHH
VKAVAETGVRVPSMCLSAHRRFPLGSEDDAVRHQGLEIMRKAIQLAQDVGIRVIQLAGYD
HHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE
VYYQQANDETRRRFRDGLKQSVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCE
QLYPDIGNLSAWDNDVQMELKAGSGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK
EECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
QTGYCGPYLIEMWSETSADPLAEVAKARDWVKARMARAGLMEAA
HCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA