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The map label for this gene is blc [C]

Identifier: 238892637

GI number: 238892637

Start: 423950

End: 424483

Strand: Reverse

Name: blc [C]

Synonym: KP1_0421

Alternate gene names: 238892637

Gene position: 424483-423950 (Counterclockwise)

Preceding gene: 238892638

Following gene: 238892630

Centisome position: 8.09

GC content: 59.93

Gene sequence:

>534_bases
ATGCGTATCCTGCCGATAATCACCGCGATTGCCGTCTCGTTCCTGTCTGTCGCCTGCAGCACGCCCACCCCGCCGCCGGG
CGTCACCGTGGTCAGTCCCTTCGACGTTCAGCGCTATCTGGGTACCTGGTATGAAATCGCCCGCTTTGACCACCCTTTTG
AAAGCGGGCTGGAAAAAGTCACGATCGCCTGGCACCCACGTGATGACGGCGGTCTGGATGTGGTGAATAAAGGTTATAAC
CCCGACCGCGGCATGTGGCAGAAAACGGACGGGGTAGCGTACTTTACCGGGGAGCCCAGCCGCGCCGCGCTGAAGATTTC
CTTCTTCGGCCCTTTCTACGGCAGCTATAACGTCATTGCTCTGGATAAGGAGTATCGTTACGCGCTGGTCTGCGGCCCCG
ATCGCGACTATCTCTGGCTGCTGGCCCGGGCGCCGACCATCGCCCCGGAGGTCAGGCAGCAGATGCTGGACATTGCCACC
CGACAGGGCTTTGATGTCGGCAAACTGGTCTGGGTCAATCAGCGCTATGATTAG

Upstream 100 bases:

>100_bases
CGGTCGCATTTCTGCTACCGGGCTCGCTTCATAGAAAAATCTTGCCGCCTTTTCCCTGCTGGACTCTACACTTAGCTTAA
AAGCCAGCAAGGAGCATGCC

Downstream 100 bases:

>100_bases
TGCGCGCTGATCTTCAGGCCAATGATGCCAATCACGATACAGACAAGGCTGGCGATACGCATGGCGCTGGCGGATTCCCC
TAACAGCACAATACCGGTCA

Product: outer membrane lipoprotein Blc

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRILPIITAIAVSFLSVACSTPTPPPGVTVVSPFDVQRYLGTWYEIARFDHPFESGLEKVTIAWHPRDDGGLDVVNKGYN
PDRGMWQKTDGVAYFTGEPSRAALKISFFGPFYGSYNVIALDKEYRYALVCGPDRDYLWLLARAPTIAPEVRQQMLDIAT
RQGFDVGKLVWVNQRYD

Sequences:

>Translated_177_residues
MRILPIITAIAVSFLSVACSTPTPPPGVTVVSPFDVQRYLGTWYEIARFDHPFESGLEKVTIAWHPRDDGGLDVVNKGYN
PDRGMWQKTDGVAYFTGEPSRAALKISFFGPFYGSYNVIALDKEYRYALVCGPDRDYLWLLARAPTIAPEVRQQMLDIAT
RQGFDVGKLVWVNQRYD
>Mature_177_residues
MRILPIITAIAVSFLSVACSTPTPPPGVTVVSPFDVQRYLGTWYEIARFDHPFESGLEKVTIAWHPRDDGGLDVVNKGYN
PDRGMWQKTDGVAYFTGEPSRAALKISFFGPFYGSYNVIALDKEYRYALVCGPDRDYLWLLARAPTIAPEVRQQMLDIAT
RQGFDVGKLVWVNQRYD

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=162, Percent_Identity=32.7160493827161, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1790592, Length=174, Percent_Identity=72.4137931034483, Blast_Score=282, Evalue=8e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272
- InterPro:   IPR002449 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19969; Mature: 19969

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILPIITAIAVSFLSVACSTPTPPPGVTVVSPFDVQRYLGTWYEIARFDHPFESGLEKV
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHCCCEEE
TIAWHPRDDGGLDVVNKGYNPDRGMWQKTDGVAYFTGEPSRAALKISFFGPFYGSYNVIA
EEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEE
LDKEYRYALVCGPDRDYLWLLARAPTIAPEVRQQMLDIATRQGFDVGKLVWVNQRYD
ECCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MRILPIITAIAVSFLSVACSTPTPPPGVTVVSPFDVQRYLGTWYEIARFDHPFESGLEKV
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHCCCEEE
TIAWHPRDDGGLDVVNKGYNPDRGMWQKTDGVAYFTGEPSRAALKISFFGPFYGSYNVIA
EEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCEEEEE
LDKEYRYALVCGPDRDYLWLLARAPTIAPEVRQQMLDIATRQGFDVGKLVWVNQRYD
ECCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7559452 [H]