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The map label for this gene is fimF [C]

Identifier: 238892563

GI number: 238892563

Start: 348178

End: 348774

Strand: Direct

Name: fimF [C]

Synonym: KP1_0337

Alternate gene names: 238892563

Gene position: 348178-348774 (Clockwise)

Preceding gene: 238892562

Following gene: 238892564

Centisome position: 6.63

GC content: 57.96

Gene sequence:

>597_bases
ATGTCGGTAATGGATGCAGGTTTTCAACATGGAAGAGGGGCTGATATGAATATGCGAGACGGCAGCACAAGGGGCCTCCT
GGTGGCCAGCCTTTTGCTGCTCTCCCTTCCGGCGCTGGCTTATGAGGGCAGCAGCACGGTCAATTTTAACGTCACGGGCA
CCATCGAAGCGCCTTCCTGTGAGGTGGCCGTGGAGCCGTCGAACAGTATCGATTTAGGCACCGTCTCCTCGCAGACGTTC
TCCGGACATGCCGGGGCGAGCGGCGCCAGCGTGCCGGTTAAGCTGGTCTTTTCCAGCTGTTCCGCCGATGCGTCGGCGGT
GACCATCGCGTTTAGCGGCACCAGCTTCGATAGCACCCACGCTTCAATCTATAAAAACTTCCAGACTGGCAGCAGCGGTG
CCAGCGGCGTCGGTTTGCAGCTGCAGAGCATGACCGACCAGCAGCCCCTTGGCCCCGGCGACCAGTATCTCTATACCTTT
GGGGACGATGCGGATATCCATACCTTTAATATGGTGGCACGTATGTATTCGCCCTATGGCCAGGCGAACCCCGGCATCGT
CGGGTTTACCGCCACGTTTGATGTGGTCTACAAATAA

Upstream 100 bases:

>100_bases
TGTTAGCGCGCTGGGGGGAGAAAAGCAGTGAGCAGTGCACCGTTCATTATGACTTCTCCGGCATGGCCCTTGGCGACGAT
ATTCTGTTCTATCAGGCCGC

Downstream 100 bases:

>100_bases
TATTTCGACAGGGATGAGTATGAAAAAACTGATCTTCTTATGCATGCTGGTACTGTGCCCCCTCTATAGCTGGGCGACCT
GCAGCGGAACTAACTCTGGC

Product: putative fimbrial subunit

Products: NA

Alternate protein names: Fimbrial Morphology

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSVMDAGFQHGRGADMNMRDGSTRGLLVASLLLLSLPALAYEGSSTVNFNVTGTIEAPSCEVAVEPSNSIDLGTVSSQTF
SGHAGASGASVPVKLVFSSCSADASAVTIAFSGTSFDSTHASIYKNFQTGSSGASGVGLQLQSMTDQQPLGPGDQYLYTF
GDDADIHTFNMVARMYSPYGQANPGIVGFTATFDVVYK

Sequences:

>Translated_198_residues
MSVMDAGFQHGRGADMNMRDGSTRGLLVASLLLLSLPALAYEGSSTVNFNVTGTIEAPSCEVAVEPSNSIDLGTVSSQTF
SGHAGASGASVPVKLVFSSCSADASAVTIAFSGTSFDSTHASIYKNFQTGSSGASGVGLQLQSMTDQQPLGPGDQYLYTF
GDDADIHTFNMVARMYSPYGQANPGIVGFTATFDVVYK
>Mature_197_residues
SVMDAGFQHGRGADMNMRDGSTRGLLVASLLLLSLPALAYEGSSTVNFNVTGTIEAPSCEVAVEPSNSIDLGTVSSQTFS
GHAGASGASVPVKLVFSSCSADASAVTIAFSGTSFDSTHASIYKNFQTGSSGASGVGLQLQSMTDQQPLGPGDQYLYTFG
DDADIHTFNMVARMYSPYGQANPGIVGFTATFDVVYK

Specific function: Involved In Regulation Of Length And Mediation Of Adhesion Of Type 1 Fimbriae (But Not Necessary For The Production Of Fimbriae). Involved In The Integration Of Fimh In The Fimbriae. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790773, Length=176, Percent_Identity=30.6818181818182, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20482; Mature: 20351

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVMDAGFQHGRGADMNMRDGSTRGLLVASLLLLSLPALAYEGSSTVNFNVTGTIEAPSC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEEEEEECCCC
EVAVEPSNSIDLGTVSSQTFSGHAGASGASVPVKLVFSSCSADASAVTIAFSGTSFDSTH
EEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHH
ASIYKNFQTGSSGASGVGLQLQSMTDQQPLGPGDQYLYTFGDDADIHTFNMVARMYSPYG
HHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
QANPGIVGFTATFDVVYK
CCCCCEEEEEEEEEEEEC
>Mature Secondary Structure 
SVMDAGFQHGRGADMNMRDGSTRGLLVASLLLLSLPALAYEGSSTVNFNVTGTIEAPSC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEEEEEECCCC
EVAVEPSNSIDLGTVSSQTFSGHAGASGASVPVKLVFSSCSADASAVTIAFSGTSFDSTH
EEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHH
ASIYKNFQTGSSGASGVGLQLQSMTDQQPLGPGDQYLYTFGDDADIHTFNMVARMYSPYG
HHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
QANPGIVGFTATFDVVYK
CCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA