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The map label for this gene is yjbJ [H]

Identifier: 238892518

GI number: 238892518

Start: 302522

End: 302731

Strand: Direct

Name: yjbJ [H]

Synonym: KP1_0286

Alternate gene names: 238892518

Gene position: 302522-302731 (Clockwise)

Preceding gene: 238892516

Following gene: 238892520

Centisome position: 5.76

GC content: 47.14

Gene sequence:

>210_bases
ATGAATAAAGACGAAATCGGCGGTAACTGGAAACAGTTTAAAGGTAAAGCCAAGGAACAGTGGGGCAAACTTACCGATGA
TGATATGACCGTAATCGAAGGGAAGCGCGACCAGCTGGTCGGCAAAATTCAGGAGCGTTACGGCTATGAGAAAGATCAGG
CTGAGAAAGAAGTCTCAGACTGGGAGCATAAGAACGACTATCGCTGGTAG

Upstream 100 bases:

>100_bases
AATTCCGAATAACGAATCGACGCCAGCATTCTCATCTATAGTTAATACCATGTCCGGCACAAAACGGGCTGTAAACCCAC
CGAATGATGAGGACGTTATT

Downstream 100 bases:

>100_bases
CGTTCCTTGATCCGAAGAATGAAGCATTTGTGTTAGTGCCTGTCTGAATGGCGCAGGGACGCGCCGTTAACCCTTTTCCC
GCTGCGGCAGCCGCTCAGCG

Product: putative stress-response protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MNKDEIGGNWKQFKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYEKDQAEKEVSDWEHKNDYRW

Sequences:

>Translated_69_residues
MNKDEIGGNWKQFKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYEKDQAEKEVSDWEHKNDYRW
>Mature_69_residues
MNKDEIGGNWKQFKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYEKDQAEKEVSDWEHKNDYRW

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

Organism=Escherichia coli, GI1790479, Length=69, Percent_Identity=88.4057971014493, Blast_Score=125, Evalue=5e-31,

Paralogues:

None

Copy number: 12620 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 440 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 8308; Mature: 8308

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDEIGGNWKQFKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYEKDQAEKEVSD
CCCCCCCCCHHHHCCCHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHH
WEHKNDYRW
HHCCCCCCC
>Mature Secondary Structure
MNKDEIGGNWKQFKGKAKEQWGKLTDDDMTVIEGKRDQLVGKIQERYGYEKDQAEKEVSD
CCCCCCCCCHHHHCCCHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHH
WEHKNDYRW
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]