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The map label for this gene is dinF [H]

Identifier: 238892516

GI number: 238892516

Start: 300932

End: 302287

Strand: Direct

Name: dinF [H]

Synonym: KP1_0284

Alternate gene names: 238892516

Gene position: 300932-302287 (Clockwise)

Preceding gene: 238892515

Following gene: 238892518

Centisome position: 5.73

GC content: 64.23

Gene sequence:

>1356_bases
GTGACGCTGCGACGTTTTTCCTCAATCAGGTCCTCAAACATGCTGCTCAACGCTGCCGATAAAGCGCTGTGGCGTCTTGC
CCTCCCTATGATTTTCTCCAACATCACCGTCCCGCTGCTGGGGCTGGTGGATACGGCGGTGATCGGCCACCTGGACAGCC
CGGTATACCTCGGCGGCGTAGCGGTCGGGGCGACGGCCACCAGTTTCCTCTTCATGCTGCTGCTGTTCCTGCGCATGAGC
ACCACCGGGCTCACCGCTCAGGCCTGGGGCGCCAAAGATCCGCAGCGCCTGGCGCGGGCGCTGGTGCAGCCGCTGGCCCT
GGCGCTGGGCGCCGGGGTGCTGATTATCCTGCTTCGCCTGCCGCTAATTGACCTCGCTCTGCATATTGTCGGCGGCAGCG
AGGCGGTGCTTGAGCAGGCGAGACGGTTTCTCGAAATTCGCTGGCTCAGCGCCCCCGCCTCGCTGGCCAACCTGGTGCTG
CTCGGCTGGCTGCTGGGCGTCCAGTACGCCCGGGCGCCGGTTATTCTGCTGGTGGTGGGTAATCTGTTGAATATTGTGCT
CGATCTGTGGCTGGTGATGGGCCTGCGGATGAACGTCCAGGGTGCGGCGCTGGCTACGGTCACCGCGGAGTACGCCACCC
TCATTATTGGCCTGCTGATGGCGAAGCGGGTGCTGACGCTGCGCGGCGTGTCGCTGGCGATGCTGAAAAACGCCTGGCGC
GGGGATCTGCGCCGTTTATTGGCGTTGAATCGGGACATCATGCTGCGCTCGCTGCTGCTGCAGCTGTGCTTTGGCGCGCT
GACCGTATTCGGCGCCCGTCTGGGCAGCGACATCGTGGCGGTTAACGCCGTACTGATGACTATGCTGACCTTTACCGCCT
ACGCGCTGGATGGCTTTGCCTATGCCGTGGAGGCTCACTCCGGCCAGGCTTACGGCGCGCGCGACGGTAGCCAGTTGCTG
GAGGTGTGGCGGGCGGCCTGCCGGCAGTCCGGCATGGTGGCGCTGGCGTTTGCCCTGATTTACAGCCTGGCGGGGCAGTA
CATTATCGCGTTGTTAACCTCACTGCCTTCCCTGCAGCAACTGGCCGATCGCTATCTGATCTGGCAGACGATCCTGCCGG
TGGTCGGCGTCTGGTGTTATCTGCTGGATGGCATGTTTATCGGCGCGACGCGCGGCGCTGAGATGAGGAACAGTATGGCG
GTCGCCGCGGCGGGGTTTGCCGTGACGCTGCTTACGCTACCGGTGCTTGGCAACCATGGTCTGTGGCTGGCGCTGGCGGT
GTTCCTCGCCCTGCGCGGCCTGTCGCTGGCGCTGATCTGGCGTCGTCACTGGCGACGCGGCACATGGTTTAGTTAG

Upstream 100 bases:

>100_bases
TCTGCGCCAGCAGAGTTTTACCATTGAGGGTCTGGCCGTTGGCGTGATCCGTAATGGAGAATGGCTGTAGCGCCTGCCTC
TGCGCAGCGTCATCTGTTGC

Downstream 100 bases:

>100_bases
TCATCTCCCGTCATTGCCGCTAGCCGTGACCTTCCCCGGTCGCGCTACGCTTACAGGGCGATTCAATAGCCCGGCTCAGC
GTGGCGCAAGCCGGGAACAT

Product: DNA-damage-inducible SOS response protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTLRRFSSIRSSNMLLNAADKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMS
TTGLTAQAWGAKDPQRLARALVQPLALALGAGVLIILLRLPLIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVL
LGWLLGVQYARAPVILLVVGNLLNIVLDLWLVMGLRMNVQGAALATVTAEYATLIIGLLMAKRVLTLRGVSLAMLKNAWR
GDLRRLLALNRDIMLRSLLLQLCFGALTVFGARLGSDIVAVNAVLMTMLTFTAYALDGFAYAVEAHSGQAYGARDGSQLL
EVWRAACRQSGMVALAFALIYSLAGQYIIALLTSLPSLQQLADRYLIWQTILPVVGVWCYLLDGMFIGATRGAEMRNSMA
VAAAGFAVTLLTLPVLGNHGLWLALAVFLALRGLSLALIWRRHWRRGTWFS

Sequences:

>Translated_451_residues
MTLRRFSSIRSSNMLLNAADKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMS
TTGLTAQAWGAKDPQRLARALVQPLALALGAGVLIILLRLPLIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVL
LGWLLGVQYARAPVILLVVGNLLNIVLDLWLVMGLRMNVQGAALATVTAEYATLIIGLLMAKRVLTLRGVSLAMLKNAWR
GDLRRLLALNRDIMLRSLLLQLCFGALTVFGARLGSDIVAVNAVLMTMLTFTAYALDGFAYAVEAHSGQAYGARDGSQLL
EVWRAACRQSGMVALAFALIYSLAGQYIIALLTSLPSLQQLADRYLIWQTILPVVGVWCYLLDGMFIGATRGAEMRNSMA
VAAAGFAVTLLTLPVLGNHGLWLALAVFLALRGLSLALIWRRHWRRGTWFS
>Mature_450_residues
TLRRFSSIRSSNMLLNAADKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMST
TGLTAQAWGAKDPQRLARALVQPLALALGAGVLIILLRLPLIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLL
GWLLGVQYARAPVILLVVGNLLNIVLDLWLVMGLRMNVQGAALATVTAEYATLIIGLLMAKRVLTLRGVSLAMLKNAWRG
DLRRLLALNRDIMLRSLLLQLCFGALTVFGARLGSDIVAVNAVLMTMLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLE
VWRAACRQSGMVALAFALIYSLAGQYIIALLTSLPSLQQLADRYLIWQTILPVVGVWCYLLDGMFIGATRGAEMRNSMAV
AAAGFAVTLLTLPVLGNHGLWLALAVFLALRGLSLALIWRRHWRRGTWFS

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=437, Percent_Identity=87.1853546910755, Blast_Score=690, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48927; Mature: 48796

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRRFSSIRSSNMLLNAADKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGV
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
AVGATATSFLFMLLLFLRMSTTGLTAQAWGAKDPQRLARALVQPLALALGAGVLIILLRL
HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVG
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
NLLNIVLDLWLVMGLRMNVQGAALATVTAEYATLIIGLLMAKRVLTLRGVSLAMLKNAWR
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GDLRRLLALNRDIMLRSLLLQLCFGALTVFGARLGSDIVAVNAVLMTMLTFTAYALDGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
YAVEAHSGQAYGARDGSQLLEVWRAACRQSGMVALAFALIYSLAGQYIIALLTSLPSLQQ
EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LADRYLIWQTILPVVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGFAVTLLTLPVLGNHG
HHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LWLALAVFLALRGLSLALIWRRHWRRGTWFS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TLRRFSSIRSSNMLLNAADKALWRLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGV
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC
AVGATATSFLFMLLLFLRMSTTGLTAQAWGAKDPQRLARALVQPLALALGAGVLIILLRL
HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVG
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
NLLNIVLDLWLVMGLRMNVQGAALATVTAEYATLIIGLLMAKRVLTLRGVSLAMLKNAWR
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GDLRRLLALNRDIMLRSLLLQLCFGALTVFGARLGSDIVAVNAVLMTMLTFTAYALDGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
YAVEAHSGQAYGARDGSQLLEVWRAACRQSGMVALAFALIYSLAGQYIIALLTSLPSLQQ
EEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LADRYLIWQTILPVVGVWCYLLDGMFIGATRGAEMRNSMAVAAAGFAVTLLTLPVLGNHG
HHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LWLALAVFLALRGLSLALIWRRHWRRGTWFS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]