Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is ascD [H]

Identifier: 238028394

GI number: 238028394

Start: 3239308

End: 3240339

Strand: Direct

Name: ascD [H]

Synonym: bglu_1g28580

Alternate gene names: 238028394

Gene position: 3239308-3240339 (Clockwise)

Preceding gene: 238028392

Following gene: 238028395

Centisome position: 82.92

GC content: 67.25

Gene sequence:

>1032_bases
ATGGCATTCAACGTAACCCTCAAGCAAAGCGGCCGGCAGTTCCAGGTCGAGGCCGACGAAACCTTGCTGGCAGCCGCGCT
GCGCCAGAACGTCCACCTGCCCTACGGCTGCAAGAACGGCGCCTGCGGTTCGTGCAAGGGACAGATCGTGCAGGGGCAGA
TCGAGCAGGGCCCGCACGCGGCCTCGGCGCTGTCGAACGACGAACGCACGCGCGGGCTCGCGCTGCTTTGCTGCGCCACG
GCGCAGTGCGACCTCGAGATCGACGTGCGCGAGATCGCCGGCGTGGACGGCGTGCAGGTGAAGAAGCTGCCGTGCCGCGT
CAACGCGATCGAGCGCCGCGCCGACGATGTCGCGGTGCTGAAGCTGCAATTGCCGGCCAACGAGCGTCTGCAGTATCTGG
CCGGCCAGTACATCGAATTCATCCTGAAGGACGGCACGCGCCGCAGCTATTCGATGGCGAGCGCGCCGCACGAGGAAGGT
CCGCTCGAACTGCACATCCGCCACATGCCGGGCGGCAAGTTCACCGACCACGTGTTCAACACCATGAAGGAGCGCGAAAT
CCTGCGCTTCGAAGGCCCGCTCGGCACGTTCTTCCTGCGCGAGGATTCGGAAAAGCCGATCGTGCTGCTCGCCTCCGGCA
CCGGCTTCGCGCCGATCAAGGCGATCGTCGAGCACGCGCGCCACCGCAATTTCACGCGGCCGATGCGCCTGTACTGGGGC
GCGCGCCGCCGCAAGGACATCTACCTGTTCGAGCTGGCCGAGCAATGGGCGCGCGAGATCCCCAACTTCGAATTCGTGCC
GGTGCTCTCGGAACCCGACGCCGACGATGCCTGGACCGGCCGCACCGGCTTCGTGCACCGCGCCGTCGTCGAGGATCTGC
CCGACCTCTCGCCGTTCCAGGTCTATGCCTGCGGCGCGCCGGTGATGGTCGAGTCGGCGCAGCGCGATTTCACGGCGCAC
CACGGGCTGCCCGAGGACGAGTTCTACGCGGACTCCTTCACCAGCGCGGCCGATCTCGCCCACGCCGTCTGA

Upstream 100 bases:

>100_bases
GGATTCGTGTCGCAATCATGGATGTAAGCGGAATTCGTAGCACAACCATTGTAGCCGCCGTGCCCGATTCGCACGGTCCC
CACTTTTGTTCAACCGACTT

Downstream 100 bases:

>100_bases
GCGCATCGGCGCGCGTGCCCGGCGGCGCGGAACGCGGAAATTCGCGCGGCGACACCCGTTTGTCGCAACCAGGCGGTTTA
CTTGGTGCGGCTCGATGCCG

Product: CDP-6-deoxy-delta-3,4-glucoseen reductase

Products: NAD(P); FMNH2; 2-octaprenyl-6-hydroxyphenol [C]

Alternate protein names: CDP-6-deoxy-delta-3,4-glucoseen reductase; E3 [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAFNVTLKQSGRQFQVEADETLLAAALRQNVHLPYGCKNGACGSCKGQIVQGQIEQGPHAASALSNDERTRGLALLCCAT
AQCDLEIDVREIAGVDGVQVKKLPCRVNAIERRADDVAVLKLQLPANERLQYLAGQYIEFILKDGTRRSYSMASAPHEEG
PLELHIRHMPGGKFTDHVFNTMKEREILRFEGPLGTFFLREDSEKPIVLLASGTGFAPIKAIVEHARHRNFTRPMRLYWG
ARRRKDIYLFELAEQWAREIPNFEFVPVLSEPDADDAWTGRTGFVHRAVVEDLPDLSPFQVYACGAPVMVESAQRDFTAH
HGLPEDEFYADSFTSAADLAHAV

Sequences:

>Translated_343_residues
MAFNVTLKQSGRQFQVEADETLLAAALRQNVHLPYGCKNGACGSCKGQIVQGQIEQGPHAASALSNDERTRGLALLCCAT
AQCDLEIDVREIAGVDGVQVKKLPCRVNAIERRADDVAVLKLQLPANERLQYLAGQYIEFILKDGTRRSYSMASAPHEEG
PLELHIRHMPGGKFTDHVFNTMKEREILRFEGPLGTFFLREDSEKPIVLLASGTGFAPIKAIVEHARHRNFTRPMRLYWG
ARRRKDIYLFELAEQWAREIPNFEFVPVLSEPDADDAWTGRTGFVHRAVVEDLPDLSPFQVYACGAPVMVESAQRDFTAH
HGLPEDEFYADSFTSAADLAHAV
>Mature_342_residues
AFNVTLKQSGRQFQVEADETLLAAALRQNVHLPYGCKNGACGSCKGQIVQGQIEQGPHAASALSNDERTRGLALLCCATA
QCDLEIDVREIAGVDGVQVKKLPCRVNAIERRADDVAVLKLQLPANERLQYLAGQYIEFILKDGTRRSYSMASAPHEEGP
LELHIRHMPGGKFTDHVFNTMKEREILRFEGPLGTFFLREDSEKPIVLLASGTGFAPIKAIVEHARHRNFTRPMRLYWGA
RRRKDIYLFELAEQWAREIPNFEFVPVLSEPDADDAWTGRTGFVHRAVVEDLPDLSPFQVYACGAPVMVESAQRDFTAHH
GLPEDEFYADSFTSAADLAHAV

Specific function: Participates in the conversion of CDP-6-deoxy-D-glycero- L-threo-4-hexulose to 3,6-dideoxy-D-glycero-D-glycero-4-hexulose together with CDP-6-deoxy-D-glycero-L-threo-4-hexulose-3-dehydrase (E1) in two consecutive steps. The detailed mechanism of E3 is not

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=234, Percent_Identity=30.7692307692308, Blast_Score=128, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6322146, Length=210, Percent_Identity=29.0476190476191, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.5.1.29 [C]

Molecular weight: Translated: 38263; Mature: 38132

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNVTLKQSGRQFQVEADETLLAAALRQNVHLPYGCKNGACGSCKGQIVQGQIEQGPHA
CEEEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCH
ASALSNDERTRGLALLCCATAQCDLEIDVREIAGVDGVQVKKLPCRVNAIERRADDVAVL
HHHCCCCHHHCCEEEEEEECCCCCEEEEHHHHCCCCCCEEEECCCCHHHHHHCCCCEEEE
KLQLPANERLQYLAGQYIEFILKDGTRRSYSMASAPHEEGPLELHIRHMPGGKFTDHVFN
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
TMKEREILRFEGPLGTFFLREDSEKPIVLLASGTGFAPIKAIVEHARHRNFTRPMRLYWG
HHHHHHEEEECCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHC
ARRRKDIYLFELAEQWAREIPNFEFVPVLSEPDADDAWTGRTGFVHRAVVEDLPDLSPFQ
CCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
VYACGAPVMVESAQRDFTAHHGLPEDEFYADSFTSAADLAHAV
EEECCCCCEEHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHCC
>Mature Secondary Structure 
AFNVTLKQSGRQFQVEADETLLAAALRQNVHLPYGCKNGACGSCKGQIVQGQIEQGPHA
EEEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCH
ASALSNDERTRGLALLCCATAQCDLEIDVREIAGVDGVQVKKLPCRVNAIERRADDVAVL
HHHCCCCHHHCCEEEEEEECCCCCEEEEHHHHCCCCCCEEEECCCCHHHHHHCCCCEEEE
KLQLPANERLQYLAGQYIEFILKDGTRRSYSMASAPHEEGPLELHIRHMPGGKFTDHVFN
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
TMKEREILRFEGPLGTFFLREDSEKPIVLLASGTGFAPIKAIVEHARHRNFTRPMRLYWG
HHHHHHEEEECCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHC
ARRRKDIYLFELAEQWAREIPNFEFVPVLSEPDADDAWTGRTGFVHRAVVEDLPDLSPFQ
CCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
VYACGAPVMVESAQRDFTAHHGLPEDEFYADSFTSAADLAHAV
EEECCCCCEEHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NAD(P)H2; FMN [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD(P)H2; FMN; 2 2-octaprenylphenol; O2 [C]

Specific reaction: NAD(P)H2 + FMN = NAD(P) + FMNH2 2 2-octaprenylphenol + O2 = 2 2-octaprenyl-6-hydroxyphenol [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10931327; 11586360; 12142430 [H]