Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028372
Identifier: 238028372
GI number: 238028372
Start: 3214208
End: 3214582
Strand: Direct
Name: 238028372
Synonym: bglu_1g28330
Alternate gene names: NA
Gene position: 3214208-3214582 (Clockwise)
Preceding gene: 238028371
Following gene: 238028379
Centisome position: 82.28
GC content: 72.0
Gene sequence:
>375_bases ATGAGCAAGCATGGGATCATCCTATTCGGACATGGTTCGCGCGACCCGCGCTGGATGGAGCCCTTCGAGCGGCTCGCCGA GCGCGTGCGCGCCGCGCACACGCTCGGCCCGGTCTCGCTCGCGTTCCTCGAACTGATGCCGCCGGAACTGGCGGACGCGG TGGCCGCGCACGCCACGCAGGGCTGCGCGGCCATCACGATCGTGCCGGTATTCGTCGGCCAGGGCGGCCACGTGCGGCGC GACCTGCCCGAACTCGTCGAGGCGTGCCGCGCCGCCCATCCGGGCATCGAGATCCGCTGCGCCACGGCGATCGGCGAGGA CGACGCCGTGCTCGACGCGATCGCACGCTACTGCCTGCAGCAGGCGAGCGCCTGA
Upstream 100 bases:
>100_bases GGCGGCGCTTCCCGCCCTGATCTACCTCGCGCTCGGCCTGTTCGCGCTGAAGTGGGTCGACCGGCACTGATCACCGATTA CCGCAGAGAACGGAGGAACG
Downstream 100 bases:
>100_bases CGGATCACACCGCCCGCCGCGGCGGCGCCTCAATGCAAAACGCCGGCCCCCAGGGGCCGGCGTTTTGCATTGAGGGCGCA TCCATCAGGCCGCGTTGCGC
Product: sirohydrochlorin cobaltochelatase
Products: NA
Alternate protein names: Sirohydrochlorin Cobaltochelatase; Cobalamin Biosynthesis CbiX; Cobaltochelatase; Cobalamin Biosynthesis Cbix Protein
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSKHGIILFGHGSRDPRWMEPFERLAERVRAAHTLGPVSLAFLELMPPELADAVAAHATQGCAAITIVPVFVGQGGHVRR DLPELVEACRAAHPGIEIRCATAIGEDDAVLDAIARYCLQQASA
Sequences:
>Translated_124_residues MSKHGIILFGHGSRDPRWMEPFERLAERVRAAHTLGPVSLAFLELMPPELADAVAAHATQGCAAITIVPVFVGQGGHVRR DLPELVEACRAAHPGIEIRCATAIGEDDAVLDAIARYCLQQASA >Mature_123_residues SKHGIILFGHGSRDPRWMEPFERLAERVRAAHTLGPVSLAFLELMPPELADAVAAHATQGCAAITIVPVFVGQGGHVRRD LPELVEACRAAHPGIEIRCATAIGEDDAVLDAIARYCLQQASA
Specific function: Unknown
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13275; Mature: 13144
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHGIILFGHGSRDPRWMEPFERLAERVRAAHTLGPVSLAFLELMPPELADAVAAHATQ CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCC GCAAITIVPVFVGQGGHVRRDLPELVEACRAAHPGIEIRCATAIGEDDAVLDAIARYCLQ CCHHEEEEEEHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH QASA HCCC >Mature Secondary Structure SKHGIILFGHGSRDPRWMEPFERLAERVRAAHTLGPVSLAFLELMPPELADAVAAHATQ CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCC GCAAITIVPVFVGQGGHVRRDLPELVEACRAAHPGIEIRCATAIGEDDAVLDAIARYCLQ CCHHEEEEEEHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH QASA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA