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The map label for this gene is lptF [H]

Identifier: 238028370

GI number: 238028370

Start: 3211934

End: 3213025

Strand: Direct

Name: lptF [H]

Synonym: bglu_1g28310

Alternate gene names: 238028370

Gene position: 3211934-3213025 (Clockwise)

Preceding gene: 238028366

Following gene: 238028371

Centisome position: 82.22

GC content: 64.1

Gene sequence:

>1092_bases
ATGATCTTTGAACGCTCCCTCCAGCGCGAGCTTGCGTATACGGCCGGCGCTGTCTTCATGGTGCTGCTCACGATCATGCT
GACGTCGATGATGATCCGTATCGTCGGCTACGCAGCGTCCGGTCAGGTGAGCCCGAAGGACGTGCTCGTGCTGATCGGCC
TCACCGTGATCGGCTATCTCGCGATGATCCTGGTCGGCACCCTGTTCGTGTCGATCCTGTTCGTGCTCACGCGCTGGTAC
CGCGACTCCGAAATGGTGGTCTGGCTCGCCTCCGGCGTGAGCCTCACGCGCCTGATCCGGCCGATCGGCGTGTTTTCCAC
GCCGATCGTGCTGCTCATCGCGTTCTTCGCGTTCGTCGGCTGGCCGTGGTCGAACCAGCAGAGCAAGCTGATCAAGGCGC
GCTTCCAGCAGCGCGACGAGGTCTCGCTGCTCGCGCCGGGTCAGTTCCGCGAATCGACCGCGACCCACCGCGTGTTCTTC
ATCGAGAAGATGTCGCCGGACCAGGCCCGGGTGCAGAACGTGTTCGTCACGACCACCGAGCAGGGCAAGGTCAACATCGT
CGTCTCGCAGACCGGCCGCGTCGAAACCGAGAAGAACGGCGACCGCTTCATCGTGCTCGAGAACGGCCGCCGCTACGACG
GCGTGCCCGGCCAGCCGAACTTCAAGATCATGCAGTTCGAGCGCTACGGCGTGAAGATCCAGAGCAAGCAGGTGGTCACG
CAGCCCACCACCACCAGCACGTCCACGCTCGAGCTGCTGCGCGATCCGACCAAGGAAAACCTGGCCGAATTCGCCTGGCG
CGCCGGCCTGCCATTGATCGCAATCAATCTGATGATCCTGGCAATCCCGCTGGCCTATCAGAATCCGCGGCGCGGCCGCA
CCGTCAACCTCGTGATGGCCGTGCTGATCTACCTGACCTATTCCAACCTGCTGAACGTGGTGCAATCGCAGATCGAGCGC
GGCAAGCTGCCGTTCGGCGTCGGGCTGGTGGTGCTGCACCTGGTGGTGGCCGGCATCGTCGCGTTCCTGTTCTGGCTACG
CGTGCGCAACCGGCCGCTCATCTCGCGGGCCACGTTCCGCCGGGGAGCCTGA

Upstream 100 bases:

>100_bases
CCTCGGATAAAATCTGGGCTAAGGGTGAAAGCCGCAATTATCCGCTATTTTTTCCCTGGCGGCGCGCGCCCCACCCCCTC
CCGCCCTCTTCGCATCAAAC

Downstream 100 bases:

>100_bases
CCGATGCGGCTCTACGAAAAGTATTTCGCGCGCCAGATCTACCTGACGTTCATCTTCGTGCTGTTCGCGTTCTCGGGGCT
GTTCTTCTTCTTCGACCTGA

Product: Permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLAMILVGTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVGWPWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFF
IEKMSPDQARVQNVFVTTTEQGKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVT
QPTTTSTSTLELLRDPTKENLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQIER
GKLPFGVGLVVLHLVVAGIVAFLFWLRVRNRPLISRATFRRGA

Sequences:

>Translated_363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLAMILVGTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVGWPWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFF
IEKMSPDQARVQNVFVTTTEQGKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVT
QPTTTSTSTLELLRDPTKENLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQIER
GKLPFGVGLVVLHLVVAGIVAFLFWLRVRNRPLISRATFRRGA
>Mature_363_residues
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYLAMILVGTLFVSILFVLTRWY
RDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVGWPWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFF
IEKMSPDQARVQNVFVTTTEQGKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVT
QPTTTSTSTLELLRDPTKENLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMAVLIYLTYSNLLNVVQSQIER
GKLPFGVGLVVLHLVVAGIVAFLFWLRVRNRPLISRATFRRGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=369, Percent_Identity=28.1842818428184, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40872; Mature: 40872

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AMILVGTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFFIEKMSPDQARVQNVFVTTTE
CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHCEEEEEEEC
QGKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVT
CCEEEEEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCEEEE
QPTTTSTSTLELLRDPTKENLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMA
CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLIYLTYSNLLNVVQSQIERGKLPFGVGLVVLHLVVAGIVAFLFWLRVRNRPLISRATFR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
RGA
CCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTIMLTSMMIRIVGYAASGQVSPKDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AMILVGTLFVSILFVLTRWYRDSEMVVWLASGVSLTRLIRPIGVFSTPIVLLIAFFAFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIKARFQQRDEVSLLAPGQFRESTATHRVFFIEKMSPDQARVQNVFVTTTE
CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHCEEEEEEEC
QGKVNIVVSQTGRVETEKNGDRFIVLENGRRYDGVPGQPNFKIMQFERYGVKIQSKQVVT
CCEEEEEEECCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCEEEE
QPTTTSTSTLELLRDPTKENLAEFAWRAGLPLIAINLMILAIPLAYQNPRRGRTVNLVMA
CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VLIYLTYSNLLNVVQSQIERGKLPFGVGLVVLHLVVAGIVAFLFWLRVRNRPLISRATFR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
RGA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]