Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is mrp [H]
Identifier: 238028340
GI number: 238028340
Start: 3176213
End: 3177301
Strand: Reverse
Name: mrp [H]
Synonym: bglu_1g28010
Alternate gene names: 238028340
Gene position: 3177301-3176213 (Counterclockwise)
Preceding gene: 238028343
Following gene: 238028339
Centisome position: 81.33
GC content: 70.34
Gene sequence:
>1089_bases ATGAGTATTGACCGGGCCACTGTCGACGCCGCGCTCGCGGCGCTCGTCGACCCCAACACGGGCCGCCCGTATGCGGCGAA CAAGGGCTTGCGCGAGGTCGCGATCGACGGCGACACGGTTTCGGTGTCGGTCGTGCTCGGCTACCCGGCGCGCAGCCAGC ACGAGGACCTGCGCCGGCGCGTCGCCGACGCGCTCGCGGCGGTGCCGGGCGTGCGCGCCGCTCGCGTGGCGGTGCAGCAG GAAATCGCCGCGCACACGGTGCAGCGCGGCGTGAAACTGCTGCCGAACGTGAAGAACATCGTCGCGGTGGCCTCGGGCAA GGGCGGCGTCGGCAAGAGCACGACCGCCGTCAACCTCGCGCTCGCGCTGGCCGCCGAGGGCGCCTCGGTCGGCATCCTCG ACGCCGACATCTACGGCCCGTCGCTGCCGACCATGCTCGGCATCCGCGGCCGCCCCGATTCGCCCGACAACCAGTCGATG AATCCGATGGAGGGCCACGGCCTGCAGGCCAACTCGATCGGCTTCCTGATCGACGAGGACAACCCGATGGTCTGGCGCGG GCCGATGGCCACCTCGGCGCTGGAGCAATTGCTGCGCCAGACCAACTGGCGCGACCTCGACTACTTGATCGTCGACATGC CGCCCGGCACCGGCGACATCCAGCTCACGCTCGCGCAGCGCGTGCCGGTGACGGGCGCCGTGATCGTGACGACGCCGCAG GACATCGCGCTGCTCGATGCGAAGAAGGGGCTCAAGATGTTCGAGAAGGTCGGCATCCCGATCATCGGCATCGTCGAGAA CATGAGCCTGCACGTCTGCTCGAACTGCGGCCACGAGGAGCCCATCTTCGGCGCGGGCGGTGCGGCGCGCATGGCGGCCA ACTACGGCGTGCCGGTGCTCGGCAGCCTGCCGCTCGACATCGCGATCCGCGAGCAGGCCGACGGCGGCACGCCGACCGTG GCGGCCGCGCCCGACTCGCCGGTGGCGGCGCGCTATCGCGAGATCGCGCGGCAGGTGGCGATCGCGATCGCCGAGCGCGC CAAGGACATGAGCTCGAAGTTCCCGTCGATCGTGGTGCAAAATACCTGA
Upstream 100 bases:
>100_bases CCCGCCGGCCGGGCCGTTTTCTGACGATTCTTCACGTTTCGTTGCGCCCAATGCGGCTACGCGCCACGCGCGGGTGGATC CACGTCTTCACGGAGTTTCG
Downstream 100 bases:
>100_bases AACAGGGGCCAAAACGTCGTTTCACGCGCGGCGAGCCGCGGTATCATGGCGACTTTTCCCCTGGTCCCCTTTCCTGTCGG CCAGCGGGGCTGCCGGTGCG
Product: Cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSIDRATVDAALAALVDPNTGRPYAANKGLREVAIDGDTVSVSVVLGYPARSQHEDLRRRVADALAAVPGVRAARVAVQQ EIAAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSLPTMLGIRGRPDSPDNQSM NPMEGHGLQANSIGFLIDEDNPMVWRGPMATSALEQLLRQTNWRDLDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQ DIALLDAKKGLKMFEKVGIPIIGIVENMSLHVCSNCGHEEPIFGAGGAARMAANYGVPVLGSLPLDIAIREQADGGTPTV AAAPDSPVAARYREIARQVAIAIAERAKDMSSKFPSIVVQNT
Sequences:
>Translated_362_residues MSIDRATVDAALAALVDPNTGRPYAANKGLREVAIDGDTVSVSVVLGYPARSQHEDLRRRVADALAAVPGVRAARVAVQQ EIAAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSLPTMLGIRGRPDSPDNQSM NPMEGHGLQANSIGFLIDEDNPMVWRGPMATSALEQLLRQTNWRDLDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQ DIALLDAKKGLKMFEKVGIPIIGIVENMSLHVCSNCGHEEPIFGAGGAARMAANYGVPVLGSLPLDIAIREQADGGTPTV AAAPDSPVAARYREIARQVAIAIAERAKDMSSKFPSIVVQNT >Mature_361_residues SIDRATVDAALAALVDPNTGRPYAANKGLREVAIDGDTVSVSVVLGYPARSQHEDLRRRVADALAAVPGVRAARVAVQQE IAAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGILDADIYGPSLPTMLGIRGRPDSPDNQSMN PMEGHGLQANSIGFLIDEDNPMVWRGPMATSALEQLLRQTNWRDLDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQD IALLDAKKGLKMFEKVGIPIIGIVENMSLHVCSNCGHEEPIFGAGGAARMAANYGVPVLGSLPLDIAIREQADGGTPTVA AAPDSPVAARYREIARQVAIAIAERAKDMSSKFPSIVVQNT
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=250, Percent_Identity=53.6, Blast_Score=272, Evalue=3e-73, Organism=Homo sapiens, GI118572611, Length=254, Percent_Identity=40.9448818897638, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI6912540, Length=253, Percent_Identity=40.3162055335968, Blast_Score=182, Evalue=3e-46, Organism=Escherichia coli, GI87082045, Length=340, Percent_Identity=57.3529411764706, Blast_Score=370, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25143050, Length=258, Percent_Identity=38.7596899224806, Blast_Score=182, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322188, Length=259, Percent_Identity=36.2934362934363, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=260, Percent_Identity=38.4615384615385, Blast_Score=173, Evalue=4e-44, Organism=Drosophila melanogaster, GI221511043, Length=250, Percent_Identity=40, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI24667611, Length=265, Percent_Identity=41.8867924528302, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI19921440, Length=241, Percent_Identity=40.2489626556017, Blast_Score=155, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37877; Mature: 37746
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDRATVDAALAALVDPNTGRPYAANKGLREVAIDGDTVSVSVVLGYPARSQHEDLRRR CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHHHHHHH VADALAAVPGVRAARVAVQQEIAAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEE LALAAEGASVGILDADIYGPSLPTMLGIRGRPDSPDNQSMNPMEGHGLQANSIGFLIDED EEEEECCCEEEEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC NPMVWRGPMATSALEQLLRQTNWRDLDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQ CCEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCC DIALLDAKKGLKMFEKVGIPIIGIVENMSLHVCSNCGHEEPIFGAGGAARMAANYGVPVL CEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEE GSLPLDIAIREQADGGTPTVAAAPDSPVAARYREIARQVAIAIAERAKDMSSKFPSIVVQ CCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE NT CC >Mature Secondary Structure SIDRATVDAALAALVDPNTGRPYAANKGLREVAIDGDTVSVSVVLGYPARSQHEDLRRR CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHHHHHHH VADALAAVPGVRAARVAVQQEIAAHTVQRGVKLLPNVKNIVAVASGKGGVGKSTTAVNLA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEE LALAAEGASVGILDADIYGPSLPTMLGIRGRPDSPDNQSMNPMEGHGLQANSIGFLIDED EEEEECCCEEEEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC NPMVWRGPMATSALEQLLRQTNWRDLDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQ CCEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCC DIALLDAKKGLKMFEKVGIPIIGIVENMSLHVCSNCGHEEPIFGAGGAARMAANYGVPVL CEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEE GSLPLDIAIREQADGGTPTVAAAPDSPVAARYREIARQVAIAIAERAKDMSSKFPSIVVQ CCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE NT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]