Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028339

Identifier: 238028339

GI number: 238028339

Start: 3175560

End: 3176087

Strand: Reverse

Name: 238028339

Synonym: bglu_1g28000

Alternate gene names: NA

Gene position: 3176087-3175560 (Counterclockwise)

Preceding gene: 238028340

Following gene: 238028338

Centisome position: 81.3

GC content: 73.48

Gene sequence:

>528_bases
ATGAAACAACGATTCGAGCGGACGGCCTGCCTCAGCGCCGGTGCCGTCCTGGCCGCCATGGTCCTGCTCAACGGCTGCAC
GTCGTTCGCGTCCACGCACGAGAAACGCGCCGACGCGCTGCTGCAGCCCACCTTCGGCAGCCAGGCGCGCGGCACGCTGA
CGTTCGTCGAGCGTCCCGACGGCGTGCAGGTCACCTACAACATCGCCGGGCTGCCGCCGAACACCGATCACGCGCTGCAG
GTGCACGACCGCGGCGACTGCAACGCGGTGGACGGCGCGAGCGCGGGCCCCGTGTTCGCGCCCAGCGCCGACCGCCTGCG
CGCCGGCGCGCGCGTGGCGGGCGATCTCGGCAACATCCACGCCGATTCGAACGGCGTGGCCGCCGGCTTCATCGTCGCGC
CCGACGTGGCCCTCGACGGGGTGCGCTCGGTGCTCGGCCGCTCGGTGCTGATCCACCGCGATGCCGGCGATCCCGCCTTC
CCGCAGCACAGCGCCGGCCCGGGCCTCGCCTGTGGCGTGGTGCGCTGA

Upstream 100 bases:

>100_bases
GCGCGGCGAGCCGCGGTATCATGGCGACTTTTCCCCTGGTCCCCTTTCCTGTCGGCCAGCGGGGCTGCCGGTGCGGCAGG
CCCGTTGGCGTGAGGATCGC

Downstream 100 bases:

>100_bases
GGATGCGGCGGCGCGTGCCGGCCGCGATCGCGTAAAATGTGCGCCTTTCCCCGCCGCCCGGTGCGACCGGCGGCGCGACC
CCGATCTGTAGCGTTATCTG

Product: Superoxide dismutase, Cu-Zn

Products: NA

Alternate protein names: Copper/Zinc Superoxide Dismutase; Cu/Zn Superoxide Dismutase; Superoxide Dismutase Cu-Zn; Exported Superoxide Dismutase; Superoxide Dismutase Like Protein; Copper-Zinc Superoxide Dismutase; Superoxide Dismutase Secreted; Superoxide Dismutase Cu/Zn

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKQRFERTACLSAGAVLAAMVLLNGCTSFASTHEKRADALLQPTFGSQARGTLTFVERPDGVQVTYNIAGLPPNTDHALQ
VHDRGDCNAVDGASAGPVFAPSADRLRAGARVAGDLGNIHADSNGVAAGFIVAPDVALDGVRSVLGRSVLIHRDAGDPAF
PQHSAGPGLACGVVR

Sequences:

>Translated_175_residues
MKQRFERTACLSAGAVLAAMVLLNGCTSFASTHEKRADALLQPTFGSQARGTLTFVERPDGVQVTYNIAGLPPNTDHALQ
VHDRGDCNAVDGASAGPVFAPSADRLRAGARVAGDLGNIHADSNGVAAGFIVAPDVALDGVRSVLGRSVLIHRDAGDPAF
PQHSAGPGLACGVVR
>Mature_175_residues
MKQRFERTACLSAGAVLAAMVLLNGCTSFASTHEKRADALLQPTFGSQARGTLTFVERPDGVQVTYNIAGLPPNTDHALQ
VHDRGDCNAVDGASAGPVFAPSADRLRAGARVAGDLGNIHADSNGVAAGFIVAPDVALDGVRSVLGRSVLIHRDAGDPAF
PQHSAGPGLACGVVR

Specific function: Unknown

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322564, Length=122, Percent_Identity=39.344262295082, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17950; Mature: 17950

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRFERTACLSAGAVLAAMVLLNGCTSFASTHEKRADALLQPTFGSQARGTLTFVERPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
GVQVTYNIAGLPPNTDHALQVHDRGDCNAVDGASAGPVFAPSADRLRAGARVAGDLGNIH
CEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEECCCHHHHHCCCEEECCCCCEE
ADSNGVAAGFIVAPDVALDGVRSVLGRSVLIHRDAGDPAFPQHSAGPGLACGVVR
ECCCCCEEEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MKQRFERTACLSAGAVLAAMVLLNGCTSFASTHEKRADALLQPTFGSQARGTLTFVERPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
GVQVTYNIAGLPPNTDHALQVHDRGDCNAVDGASAGPVFAPSADRLRAGARVAGDLGNIH
CEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEECCCHHHHHCCCEEECCCCCEE
ADSNGVAAGFIVAPDVALDGVRSVLGRSVLIHRDAGDPAFPQHSAGPGLACGVVR
ECCCCCEEEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA