Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is argH [H]
Identifier: 238028335
GI number: 238028335
Start: 3170272
End: 3171678
Strand: Direct
Name: argH [H]
Synonym: bglu_1g27960
Alternate gene names: 238028335
Gene position: 3170272-3171678 (Clockwise)
Preceding gene: 238028334
Following gene: 238028341
Centisome position: 81.15
GC content: 68.94
Gene sequence:
>1407_bases ATGACATCCCAATTGCACAAAAAGGGCGAGGCCTGGTCGGCCCGCTTCTCGGAACCGATGTCGGATCTGGTCAAGCGCTA TACCTCGTCGGTGTTTTTCGACAAGCGCCTCGCGCTCGTCGACATCGAGGGCTCGCTCGCGCATGCGAAGATGCTGGCCG CGCAGAAGATCATCAGCACCGACGACCTCGCCGCAATCGAGCGCGGGATGGCGCAGATCCGGGGCGAAATCGAGCGCGGC GAATTCGAATGGCAGCTCGACCTCGAGGACGTCCACCTCAACATCGAGGCGCGCCTGACCGCGCTGATCGGCGACGCCGG CAAGCGGCTGCACACCGGCCGCTCGCGCAACGACCAGGTCGCCACCGACATCCGGCTGTGGCTGCGCGGCGAGATCGACC GCATCGGCGAACTGCTCGGCCAGCTGCGCGGCGCCCTGCTCGACCTCGCCGAACGGCACGCCGACACGATCCTGCCCGGC TTCACGCACCTGCAGGTCGCGCAGCCCGTCACGTTCGGCCACCACCTGCTCGCCTACGTGGAGATGTTCACGCGCGACGC GGGCCGCCTGCGCGACTGCCGCGCGCGCGTGAACCGCCTGCCGCTCGGCGCGGCTGCGCTGGCCGGCACCAGCTACCCGA TCGACCGCCACGCGGTGGCCGCCACGCTCGGCTTCGACGGAATCTGCGCGAACTCGCTCGACGCGGTGTCGGATCGCGAC TTCGCGATCGAATTCACGGCCGCCGCCGCGCTGGTGATGACGCACGTCTCGCGCTTCTCCGAGGAGCTGGTGCTGTGGAT GAGCCCGCGCGTGGGCTTCATCGACATCGCCGACCGCTTCTGCACCGGTTCGTCGATCATGCCGCAGAAGAAGAACCCGG ACGTGCCCGAACTCGCGCGCGGCAAGACCGGCCGCGTCAACGGCCACCTGATGGCGCTCCTGACGCTGATGAAGGGCCAG CCGCTCGCGTACAACAAGGACAACCAGGAAGACAAGGAGCCGCTGTTCGACACGGTCGACACCGTCGCCGACACGCTGCG GATCTTCGCCGAGATGGTGGCCGGCATCACCGTGAAGGCCGAGCCGATGCGCGCCGCGGCGCTGCAGGGCTTCTCGACCG CGACCGACCTGGCCGACTATCTGGTCAAGCGCGGGCTGGCGTTCCGCGACGCCCACGAAGCCGTCGCGCACGCCGTGAAG ATCTGCGACGAGCGCGGCATCGACCTGGCCGAGCTCACGCTCGACGAAATGAAGCGCGACCTGCCGAACGTGGCGCACCT GATCGGCGACGACGTGTTCTCGTACCTGACGCTCGAAGGCTCGGTGGCGAGCCGCAACCACCCGGGCGGCACGGCGCCGG ACCAAGTGCGCGCGGCGATCGCCGCGGCGCGTGCGGCACTCGGCTGA
Upstream 100 bases:
>100_bases CGCGCCTGCCGCCCGGCGCCGGTCGGCCCGCGCGTCGCCGAATGCTAGAATCCCCACCTGCCCCGCGGCGCTCGCCGCGT CACTCCCATTACTCATCGCC
Downstream 100 bases:
>100_bases CGCGCGCGCGACACCATGCCCAGCCGGCCGGCTGGGCAGCCAGGAAAAACGGACGCCGAGGCGTCCGTTTTTTTTGGGGC TTGTGGACCGCGCGCGTCAC
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTSQLHKKGEAWSARFSEPMSDLVKRYTSSVFFDKRLALVDIEGSLAHAKMLAAQKIISTDDLAAIERGMAQIRGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGELLGQLRGALLDLAERHADTILPG FTHLQVAQPVTFGHHLLAYVEMFTRDAGRLRDCRARVNRLPLGAAALAGTSYPIDRHAVAATLGFDGICANSLDAVSDRD FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKAEPMRAAALQGFSTATDLADYLVKRGLAFRDAHEAVAHAVK ICDERGIDLAELTLDEMKRDLPNVAHLIGDDVFSYLTLEGSVASRNHPGGTAPDQVRAAIAAARAALG
Sequences:
>Translated_468_residues MTSQLHKKGEAWSARFSEPMSDLVKRYTSSVFFDKRLALVDIEGSLAHAKMLAAQKIISTDDLAAIERGMAQIRGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGELLGQLRGALLDLAERHADTILPG FTHLQVAQPVTFGHHLLAYVEMFTRDAGRLRDCRARVNRLPLGAAALAGTSYPIDRHAVAATLGFDGICANSLDAVSDRD FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKAEPMRAAALQGFSTATDLADYLVKRGLAFRDAHEAVAHAVK ICDERGIDLAELTLDEMKRDLPNVAHLIGDDVFSYLTLEGSVASRNHPGGTAPDQVRAAIAAARAALG >Mature_467_residues TSQLHKKGEAWSARFSEPMSDLVKRYTSSVFFDKRLALVDIEGSLAHAKMLAAQKIISTDDLAAIERGMAQIRGEIERGE FEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGELLGQLRGALLDLAERHADTILPGF THLQVAQPVTFGHHLLAYVEMFTRDAGRLRDCRARVNRLPLGAAALAGTSYPIDRHAVAATLGFDGICANSLDAVSDRDF AIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQP LAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKAEPMRAAALQGFSTATDLADYLVKRGLAFRDAHEAVAHAVKI CDERGIDLAELTLDEMKRDLPNVAHLIGDDVFSYLTLEGSVASRNHPGGTAPDQVRAAIAAARAALG
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=461, Percent_Identity=39.6963123644252, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI68303542, Length=461, Percent_Identity=39.6963123644252, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI68303547, Length=461, Percent_Identity=37.527114967462, Blast_Score=315, Evalue=5e-86, Organism=Homo sapiens, GI68303549, Length=461, Percent_Identity=37.0932754880694, Blast_Score=307, Evalue=2e-83, Organism=Escherichia coli, GI1790398, Length=461, Percent_Identity=45.5531453362256, Blast_Score=396, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6321806, Length=459, Percent_Identity=40.3050108932462, Blast_Score=332, Evalue=7e-92, Organism=Drosophila melanogaster, GI221473854, Length=448, Percent_Identity=38.6160714285714, Blast_Score=305, Evalue=5e-83, Organism=Drosophila melanogaster, GI78706858, Length=448, Percent_Identity=38.6160714285714, Blast_Score=305, Evalue=5e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 51196; Mature: 51065
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQLHKKGEAWSARFSEPMSDLVKRYTSSVFFDKRLALVDIEGSLAHAKMLAAQKIIST CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCC DDLAAIERGMAQIRGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCHHCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH ATDIRLWLRGEIDRIGELLGQLRGALLDLAERHADTILPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH EMFTRDAGRLRDCRARVNRLPLGAAALAGTSYPIDRHAVAATLGFDGICANSLDAVSDRD HHHHHCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELAR EEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKA CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC EPMRAAALQGFSTATDLADYLVKRGLAFRDAHEAVAHAVKICDERGIDLAELTLDEMKRD CCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LPNVAHLIGDDVFSYLTLEGSVASRNHPGGTAPDQVRAAIAAARAALG HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TSQLHKKGEAWSARFSEPMSDLVKRYTSSVFFDKRLALVDIEGSLAHAKMLAAQKIIST CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCC DDLAAIERGMAQIRGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCHHCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH ATDIRLWLRGEIDRIGELLGQLRGALLDLAERHADTILPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHH EMFTRDAGRLRDCRARVNRLPLGAAALAGTSYPIDRHAVAATLGFDGICANSLDAVSDRD HHHHHCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC FAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELAR EEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKA CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC EPMRAAALQGFSTATDLADYLVKRGLAFRDAHEAVAHAVKICDERGIDLAELTLDEMKRD CCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LPNVAHLIGDDVFSYLTLEGSVASRNHPGGTAPDQVRAAIAAARAALG HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA