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The map label for this gene is yhbQ [C]

Identifier: 238028325

GI number: 238028325

Start: 3156201

End: 3156704

Strand: Direct

Name: yhbQ [C]

Synonym: bglu_1g27860

Alternate gene names: 238028325

Gene position: 3156201-3156704 (Clockwise)

Preceding gene: 238028324

Following gene: 238028327

Centisome position: 80.79

GC content: 77.98

Gene sequence:

>504_bases
ATGTCCTGGTTCCTGTATCTGATCGAATGCGCCGACGGCAGCGTCTACACCGGCATCACGACCGACGTGGACGCGCGCTT
CGCGCGGCACGCGAACGGCACGGGCGCGCGCTACACGCGCTCGCGCAAGCCGCGTGCGGTGCTCGCCGCGTTCCCGCTGG
CCGACCGCTCGGTCGCCTCGCGGGCCGAATACTGGGTCAAGCGCCTGACGCCGGCGCGCAAGCGCGAACTCGCGAGCGGG
CTGCGCACGCTCGAATCGGTGCTGCCGGCTGGCATCGTCGACGGACCGCCCCGTGACGCCGCGCCGGATGCGCCCGGCAT
CGCGCGCGGCCTGCGTTCGCGCCATGCCGGCGGCGCGCCGTGGGCCGTCGAGGCGGACGACGGCGCCGCGCCGGACCCGC
AGCCGGCGTGGTCCCTCAGCGCCGGCCGCCGCCGGGCCGGCGGGCCGAAGCCCGCGCGCCCGGCCACCGGCCGCTCCGGC
CGGCGCGTCTGCGCCGCCGCGTGA

Upstream 100 bases:

>100_bases
TACATGGACGAGTTGCGCGAGCACAATCCGTTCAAGGACGGCGCGCAGTGAGCGCGCGCGGCCTTCGACGCCACTGACGG
CCCGCTACCGGCCGCCCGCC

Downstream 100 bases:

>100_bases
TGCGCGCCGTCCAAAACAAAGCCGCGCGGCCCCGGAACGGGGCACGCGCGGCCTGATGCCACGTCGCGGACGGCGTCTTA
CTTCTTCGCGTTCGCAAGGC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSWFLYLIECADGSVYTGITTDVDARFARHANGTGARYTRSRKPRAVLAAFPLADRSVASRAEYWVKRLTPARKRELASG
LRTLESVLPAGIVDGPPRDAAPDAPGIARGLRSRHAGGAPWAVEADDGAAPDPQPAWSLSAGRRRAGGPKPARPATGRSG
RRVCAAA

Sequences:

>Translated_167_residues
MSWFLYLIECADGSVYTGITTDVDARFARHANGTGARYTRSRKPRAVLAAFPLADRSVASRAEYWVKRLTPARKRELASG
LRTLESVLPAGIVDGPPRDAAPDAPGIARGLRSRHAGGAPWAVEADDGAAPDPQPAWSLSAGRRRAGGPKPARPATGRSG
RRVCAAA
>Mature_166_residues
SWFLYLIECADGSVYTGITTDVDARFARHANGTGARYTRSRKPRAVLAAFPLADRSVASRAEYWVKRLTPARKRELASGL
RTLESVLPAGIVDGPPRDAAPDAPGIARGLRSRHAGGAPWAVEADDGAAPDPQPAWSLSAGRRRAGGPKPARPATGRSGR
RVCAAA

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=77, Percent_Identity=48.0519480519481, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 17670; Mature: 17539

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFLYLIECADGSVYTGITTDVDARFARHANGTGARYTRSRKPRAVLAAFPLADRSVAS
CCEEEEEEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH
RAEYWVKRLTPARKRELASGLRTLESVLPAGIVDGPPRDAAPDAPGIARGLRSRHAGGAP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
WAVEADDGAAPDPQPAWSLSAGRRRAGGPKPARPATGRSGRRVCAAA
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
SWFLYLIECADGSVYTGITTDVDARFARHANGTGARYTRSRKPRAVLAAFPLADRSVAS
CEEEEEEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHH
RAEYWVKRLTPARKRELASGLRTLESVLPAGIVDGPPRDAAPDAPGIARGLRSRHAGGAP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
WAVEADDGAAPDPQPAWSLSAGRRRAGGPKPARPATGRSGRRVCAAA
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA