Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028324
Identifier: 238028324
GI number: 238028324
Start: 3154973
End: 3156151
Strand: Direct
Name: 238028324
Synonym: bglu_1g27850
Alternate gene names: NA
Gene position: 3154973-3156151 (Clockwise)
Preceding gene: 238028321
Following gene: 238028325
Centisome position: 80.76
GC content: 67.94
Gene sequence:
>1179_bases TTGAAACACGAACGCAACGATTATCGCATGGGGCTCCTGTCGTCTCCGCTCGAAACGGGCGCCGACGAATGGAACGCCCT GCTCGAACGGCAGGCGCATCCCACGCCGTTCCTGCGCCATGAATTTCTGGCCGCGCTGCACGCCACCGGCTGCGCGACCG GCGAGACCGGCTGGTCGCCGAACTTCGTCACGCTCACCGACACGGCCACCAACGCGCTGGTGGCGGCCGCGCCGCTCTAC GCCAAGCAGCATTCGTATGGCGAATACGTGTTCGACTGGGCCTGGGCCGACGCCTACCAGCGCAACGGCCTGCCCTACTA TCCGAAGCTGCTCTGCGCGGTGCCGTTTACGCCGGTGCAGGGCACGCGCCTGATCGCCGCCGATTCGCGCGCGCGCCGCC AGCTCGCGGCCACGCTCGTCGCGCTGGCCGAGCAGAGCGAGGTGTCGTCGCTGCACGTGCTGTTTCCGAGCACCGACGAA GCCGCGCTGCTCGGCGAGATGGGCATGATGCTGCGCGAAGGCGTGCAGTTCCACTGGCTCAACGACGGCTACCGGCACTT CGACGATTTCCTCTCGACGCTCGAACAGAAAAAGCGCAAGAACATTCGCGCCGAGCGGCGCAAGGTGGCCGAGGCCGGCG TCACGTTGCGCCGCGTGCGCGGCGAGGACGCCACCGACGCCGACTGGCGCTTCTTCTCGCGCTGCTACCGGCAGACCTAC CGCGAACACTATTCGAGCCCGTACCTGAACCTCGACTTCTTCCGGCGCATCGGCGCGACCATGCCGGAGAATCTGCTGCT CGTGATCGCCGAGGCCGAAGGCAAGCCGATCGCCAGCGCGCTGGCCGTGTACCGGCGCGATCCGGCCGGCGGCGGCACGC TCTACGGCCGCTACTGGGGCGCGCTCGAACACGTGCCCTGCCTGCATTTCGAAACCGCCTACTATCAGCTGCTGGAGTTC TGCATCGAGGAGCAGTTGAGCGCGTTCGAGGGCGGCGCGCAGGGCGAGCACAAGCTCGCGCGCGGCTTCATGCCGACCGT CACGCGCTCGGCGCACTGGCTCGCGCACCCGGCGTTCGCCGACGCGGTCGGCGCGTTCCTCGAGCGCGAGACGGGGCAGA TCCATGCCTACATGGACGAGTTGCGCGAGCACAATCCGTTCAAGGACGGCGCGCAGTGA
Upstream 100 bases:
>100_bases CGGAATCTGCGCGGCCTCGCGGCTCGCGTGACGAGCGCCCGCGGGCGCATCACCGGTGCGCGCCGCGTCGCGCGCGCCGA ACCAAACGGATCTCTGACGG
Downstream 100 bases:
>100_bases GCGCGCGCGGCCTTCGACGCCACTGACGGCCCGCTACCGGCCGCCCGCCATGTCCTGGTTCCTGTATCTGATCGAATGCG CCGACGGCAGCGTCTACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKHERNDYRMGLLSSPLETGADEWNALLERQAHPTPFLRHEFLAALHATGCATGETGWSPNFVTLTDTATNALVAAAPLY AKQHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGTRLIAADSRARRQLAATLVALAEQSEVSSLHVLFPSTDE AALLGEMGMMLREGVQFHWLNDGYRHFDDFLSTLEQKKRKNIRAERRKVAEAGVTLRRVRGEDATDADWRFFSRCYRQTY REHYSSPYLNLDFFRRIGATMPENLLLVIAEAEGKPIASALAVYRRDPAGGGTLYGRYWGALEHVPCLHFETAYYQLLEF CIEEQLSAFEGGAQGEHKLARGFMPTVTRSAHWLAHPAFADAVGAFLERETGQIHAYMDELREHNPFKDGAQ
Sequences:
>Translated_392_residues MKHERNDYRMGLLSSPLETGADEWNALLERQAHPTPFLRHEFLAALHATGCATGETGWSPNFVTLTDTATNALVAAAPLY AKQHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGTRLIAADSRARRQLAATLVALAEQSEVSSLHVLFPSTDE AALLGEMGMMLREGVQFHWLNDGYRHFDDFLSTLEQKKRKNIRAERRKVAEAGVTLRRVRGEDATDADWRFFSRCYRQTY REHYSSPYLNLDFFRRIGATMPENLLLVIAEAEGKPIASALAVYRRDPAGGGTLYGRYWGALEHVPCLHFETAYYQLLEF CIEEQLSAFEGGAQGEHKLARGFMPTVTRSAHWLAHPAFADAVGAFLERETGQIHAYMDELREHNPFKDGAQ >Mature_392_residues MKHERNDYRMGLLSSPLETGADEWNALLERQAHPTPFLRHEFLAALHATGCATGETGWSPNFVTLTDTATNALVAAAPLY AKQHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQGTRLIAADSRARRQLAATLVALAEQSEVSSLHVLFPSTDE AALLGEMGMMLREGVQFHWLNDGYRHFDDFLSTLEQKKRKNIRAERRKVAEAGVTLRRVRGEDATDADWRFFSRCYRQTY REHYSSPYLNLDFFRRIGATMPENLLLVIAEAEGKPIASALAVYRRDPAGGGTLYGRYWGALEHVPCLHFETAYYQLLEF CIEEQLSAFEGGAQGEHKLARGFMPTVTRSAHWLAHPAFADAVGAFLERETGQIHAYMDELREHNPFKDGAQ
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44313; Mature: 44313
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHERNDYRMGLLSSPLETGADEWNALLERQAHPTPFLRHEFLAALHATGCATGETGWSP CCCCCCCHHHCHHCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC NFVTLTDTATNALVAAAPLYAKQHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQ CEEEEECCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCCCC GTRLIAADSRARRQLAATLVALAEQSEVSSLHVLFPSTDEAALLGEMGMMLREGVQFHWL CCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEE NDGYRHFDDFLSTLEQKKRKNIRAERRKVAEAGVTLRRVRGEDATDADWRFFSRCYRQTY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHH REHYSSPYLNLDFFRRIGATMPENLLLVIAEAEGKPIASALAVYRRDPAGGGTLYGRYWG HHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHH ALEHVPCLHFETAYYQLLEFCIEEQLSAFEGGAQGEHKLARGFMPTVTRSAHWLAHPAFA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCHHHHCHHHH DAVGAFLERETGQIHAYMDELREHNPFKDGAQ HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKHERNDYRMGLLSSPLETGADEWNALLERQAHPTPFLRHEFLAALHATGCATGETGWSP CCCCCCCHHHCHHCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC NFVTLTDTATNALVAAAPLYAKQHSYGEYVFDWAWADAYQRNGLPYYPKLLCAVPFTPVQ CEEEEECCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCCCC GTRLIAADSRARRQLAATLVALAEQSEVSSLHVLFPSTDEAALLGEMGMMLREGVQFHWL CCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEE NDGYRHFDDFLSTLEQKKRKNIRAERRKVAEAGVTLRRVRGEDATDADWRFFSRCYRQTY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHH REHYSSPYLNLDFFRRIGATMPENLLLVIAEAEGKPIASALAVYRRDPAGGGTLYGRYWG HHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHH ALEHVPCLHFETAYYQLLEFCIEEQLSAFEGGAQGEHKLARGFMPTVTRSAHWLAHPAFA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCHHHHCHHHH DAVGAFLERETGQIHAYMDELREHNPFKDGAQ HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA