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The map label for this gene is ompR [H]

Identifier: 238028314

GI number: 238028314

Start: 3144543

End: 3145268

Strand: Reverse

Name: ompR [H]

Synonym: bglu_1g27750

Alternate gene names: 238028314

Gene position: 3145268-3144543 (Counterclockwise)

Preceding gene: 238028322

Following gene: 238028313

Centisome position: 80.51

GC content: 71.21

Gene sequence:

>726_bases
ATGACTACCCAGATCCTCATCGTCGACGACGACCAAGAACTGCGCGACCTGCTGCGCGACTACCTCGTGCGCCAGGGCAT
GGAAGTGTCGGTGCTGCACGACGCCGCCTCGCTCGAGAAGCGCCTGGAGCGCGAGCGCCCCGACCTGATCGTGCTGGACC
TGATGATGCCGGGCGTCGACGGCTTGACCGCGCTGCGCCGGCTGCGCGCGGCCGGCGACGACATCCCGGTGATCATGCTG
ACCGCGCGCGCCGACGACGTGGACCGCATCGTCGGCCTCGAGCTCGGCGCCGACGACTACCTCGGCAAGCCGTTCAACCC
GCGCGAGCTGCTGGCGCGCGCCCAGGCGGTGCTGCGCCGGCGCCGCGCCACGCCGTCGGCGGCGGCGCCCGAGCAGCGCG
AGCCCTACGCGTTCGGCCGCTTCGTGCTCGACTTCCAGGCGCGCACGCTGTCGGTGGACGGCCGGCCCGCCACGCTGTCG
AGCAGCGAGTTCGCGCTGCTGAAGATCTTCGTCAACAACGCGCTGCGCACGCTCACCCGCGAGCGCCTGCTCGAACTGCT
GCACGGCCCCGAGTACGACGGCACCGACCGCGGCATCGACGTGCAGGTCTGGCGCCTGCGGCGGATCCTGGAAAGCGATC
CTTCCACGCCGCGCTTCATCCAGACCGTGCGTGGCCGCGGCTACGTGTTCGTGCCCAACGGCGAGGCCCATGCGCAGACC
CATTGA

Upstream 100 bases:

>100_bases
GTTACCGCGCATTACATCCGGCTTGCACGGTAATTCCCAGTAACCCATTGGCCGGTATGTTTCAGCCGGGCCCGCCAAGC
CGCACGGTAAACTTCACGCC

Downstream 100 bases:

>100_bases
TTCGCTGTTCGGCCGGCTCGCCATGCTGGTGGTGGGCGTGCTGCTGCTGTCGCACTTCGCGTGGTACCTGGCGATCCGGC
TCGACCGCAACGAATCGCAG

Product: putative two-component system, response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTTQILIVDDDQELRDLLRDYLVRQGMEVSVLHDAASLEKRLERERPDLIVLDLMMPGVDGLTALRRLRAAGDDIPVIML
TARADDVDRIVGLELGADDYLGKPFNPRELLARAQAVLRRRRATPSAAAPEQREPYAFGRFVLDFQARTLSVDGRPATLS
SSEFALLKIFVNNALRTLTRERLLELLHGPEYDGTDRGIDVQVWRLRRILESDPSTPRFIQTVRGRGYVFVPNGEAHAQT
H

Sequences:

>Translated_241_residues
MTTQILIVDDDQELRDLLRDYLVRQGMEVSVLHDAASLEKRLERERPDLIVLDLMMPGVDGLTALRRLRAAGDDIPVIML
TARADDVDRIVGLELGADDYLGKPFNPRELLARAQAVLRRRRATPSAAAPEQREPYAFGRFVLDFQARTLSVDGRPATLS
SSEFALLKIFVNNALRTLTRERLLELLHGPEYDGTDRGIDVQVWRLRRILESDPSTPRFIQTVRGRGYVFVPNGEAHAQT
H
>Mature_240_residues
TTQILIVDDDQELRDLLRDYLVRQGMEVSVLHDAASLEKRLERERPDLIVLDLMMPGVDGLTALRRLRAAGDDIPVIMLT
ARADDVDRIVGLELGADDYLGKPFNPRELLARAQAVLRRRRATPSAAAPEQREPYAFGRFVLDFQARTLSVDGRPATLSS
SEFALLKIFVNNALRTLTRERLLELLHGPEYDGTDRGIDVQVWRLRRILESDPSTPRFIQTVRGRGYVFVPNGEAHAQTH

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=52.1551724137931, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=37.3390557939914, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=37.9912663755458, Blast_Score=143, Evalue=9e-36,
Organism=Escherichia coli, GI1786599, Length=232, Percent_Identity=37.9310344827586, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=39.5652173913043, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=35.3191489361702, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=36.3636363636364, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786911, Length=232, Percent_Identity=38.3620689655172, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=37.8854625550661, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=34.070796460177, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786784, Length=233, Percent_Identity=35.6223175965665, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=30.5309734513274, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=33.7719298245614, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790552, Length=232, Percent_Identity=34.051724137931, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=34.2592592592593, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=35.6435643564356, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=102, Percent_Identity=35.2941176470588, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27251; Mature: 27119

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQILIVDDDQELRDLLRDYLVRQGMEVSVLHDAASLEKRLERERPDLIVLDLMMPGVD
CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCH
GLTALRRLRAAGDDIPVIMLTARADDVDRIVGLELGADDYLGKPFNPRELLARAQAVLRR
HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHH
RRATPSAAAPEQREPYAFGRFVLDFQARTLSVDGRPATLSSSEFALLKIFVNNALRTLTR
HCCCCCCCCCCCCCCHHHHHEEEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHH
ERLLELLHGPEYDGTDRGIDVQVWRLRRILESDPSTPRFIQTVRGRGYVFVPNGEAHAQT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCC
H
C
>Mature Secondary Structure 
TTQILIVDDDQELRDLLRDYLVRQGMEVSVLHDAASLEKRLERERPDLIVLDLMMPGVD
CEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCH
GLTALRRLRAAGDDIPVIMLTARADDVDRIVGLELGADDYLGKPFNPRELLARAQAVLRR
HHHHHHHHHHCCCCCCEEEEEECCCCHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHH
RRATPSAAAPEQREPYAFGRFVLDFQARTLSVDGRPATLSSSEFALLKIFVNNALRTLTR
HCCCCCCCCCCCCCCHHHHHEEEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHH
ERLLELLHGPEYDGTDRGIDVQVWRLRRILESDPSTPRFIQTVRGRGYVFVPNGEAHAQT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]