| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028290
Identifier: 238028290
GI number: 238028290
Start: 3119531
End: 3120370
Strand: Direct
Name: 238028290
Synonym: bglu_1g27480
Alternate gene names: NA
Gene position: 3119531-3120370 (Clockwise)
Preceding gene: 238028288
Following gene: 238028291
Centisome position: 79.85
GC content: 55.36
Gene sequence:
>840_bases ATGGCGGATAGACGGGATACAGACGGACTGCGCGTGGTACTGAGTGCGCCACAGCTGGCGGCAGTGCTCGCTCGCCAGTC GATCAACCAGACGGAAATTCTATCCAACCGACTATGGGGCGGCCTCCAAATCGTCGGCGGGGTGATGGAAATGGCGGGGG CGGCGGTACTCTGCGTCGCACCGGAACCGACGATGGCGAGCAAGGCCGGATGTATCGTATTCGGCGTACACGGCTCGGAT ACCGTGTCGGCGGGTTGGCGGCAGGTTTGGAGCGGCCAGGACACGATCACGCTGACCCAACAAGGCATGACGAAGCTGGC CGAGACGATGAAGGTCGGCCCGGACATGGCGAACAGCCTCGGCCTGTCGTTGGATATGATCGTGCCGTTCGGCTTTGCGG GTTCGATCAAAGCGGCTCGCGCGGCTCGGGTCACGATGGGCCGGATCAATCTGGAAATGCATGAGGCAAAGGCATCCGAT GCAAGGCTCGGAGGGCACACCATCGAAAGGCATGTCGGAAAGAGTGAAGCGTGGTTGCGAGACAGGCTGGCGCGCGAGCC GAAACTTGAAATAGCAAGCTCATTTAGAAATATGAATGCTGCTGAATGGGCTATTTCGGAAGTGTTGCAGAAACACTCGG CTCGGGTTAGTGCCTGGGCGCAGTCAACTAGCGGATCCAATAGACTTCAGCTGGTTGGCGAGACAGGACGGAATGTCGGA TATGGTTTGATCAGAGAAACCGGGAAGATGATCGAATTAAGCAAATCCCAAGTATTTCTGAAAAAGGAATTTTATAACGG CATGCCATATTATATTATTACAGCATATCTGATTAAATAA
Upstream 100 bases:
>100_bases GGCCAAACGTCGCTCCCCTCCAAAGTCAGCCTTCGCCCATTTCTTGTTCCGTCGTGCCTCGTTAGCTTCGAAGGCCCACC AGATCACAATGGAGAATCGA
Downstream 100 bases:
>100_bases TTTATGAAATCAAGCGATAGATACCCCGAGCTTTCAAATTTCATTAAAAATTATTTTGGCGAAGATTTCGATTTATGGGG AAATACAATAGAGGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MADRRDTDGLRVVLSAPQLAAVLARQSINQTEILSNRLWGGLQIVGGVMEMAGAAVLCVAPEPTMASKAGCIVFGVHGSD TVSAGWRQVWSGQDTITLTQQGMTKLAETMKVGPDMANSLGLSLDMIVPFGFAGSIKAARAARVTMGRINLEMHEAKASD ARLGGHTIERHVGKSEAWLRDRLAREPKLEIASSFRNMNAAEWAISEVLQKHSARVSAWAQSTSGSNRLQLVGETGRNVG YGLIRETGKMIELSKSQVFLKKEFYNGMPYYIITAYLIK
Sequences:
>Translated_279_residues MADRRDTDGLRVVLSAPQLAAVLARQSINQTEILSNRLWGGLQIVGGVMEMAGAAVLCVAPEPTMASKAGCIVFGVHGSD TVSAGWRQVWSGQDTITLTQQGMTKLAETMKVGPDMANSLGLSLDMIVPFGFAGSIKAARAARVTMGRINLEMHEAKASD ARLGGHTIERHVGKSEAWLRDRLAREPKLEIASSFRNMNAAEWAISEVLQKHSARVSAWAQSTSGSNRLQLVGETGRNVG YGLIRETGKMIELSKSQVFLKKEFYNGMPYYIITAYLIK >Mature_278_residues ADRRDTDGLRVVLSAPQLAAVLARQSINQTEILSNRLWGGLQIVGGVMEMAGAAVLCVAPEPTMASKAGCIVFGVHGSDT VSAGWRQVWSGQDTITLTQQGMTKLAETMKVGPDMANSLGLSLDMIVPFGFAGSIKAARAARVTMGRINLEMHEAKASDA RLGGHTIERHVGKSEAWLRDRLAREPKLEIASSFRNMNAAEWAISEVLQKHSARVSAWAQSTSGSNRLQLVGETGRNVGY GLIRETGKMIELSKSQVFLKKEFYNGMPYYIITAYLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30281; Mature: 30150
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRRDTDGLRVVLSAPQLAAVLARQSINQTEILSNRLWGGLQIVGGVMEMAGAAVLCVA CCCCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEC PEPTMASKAGCIVFGVHGSDTVSAGWRQVWSGQDTITLTQQGMTKLAETMKVGPDMANSL CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCHHHHH GLSLDMIVPFGFAGSIKAARAARVTMGRINLEMHEAKASDARLGGHTIERHVGKSEAWLR CCEEEEEECCCCCCCHHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHH DRLAREPKLEIASSFRNMNAAEWAISEVLQKHSARVSAWAQSTSGSNRLQLVGETGRNVG HHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC YGLIRETGKMIELSKSQVFLKKEFYNGMPYYIITAYLIK HHHHHHCCCCEEECHHHHHHHHHHHCCCCHHHHEEECCC >Mature Secondary Structure ADRRDTDGLRVVLSAPQLAAVLARQSINQTEILSNRLWGGLQIVGGVMEMAGAAVLCVA CCCCCCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEC PEPTMASKAGCIVFGVHGSDTVSAGWRQVWSGQDTITLTQQGMTKLAETMKVGPDMANSL CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCHHHHH GLSLDMIVPFGFAGSIKAARAARVTMGRINLEMHEAKASDARLGGHTIERHVGKSEAWLR CCEEEEEECCCCCCCHHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHH DRLAREPKLEIASSFRNMNAAEWAISEVLQKHSARVSAWAQSTSGSNRLQLVGETGRNVG HHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC YGLIRETGKMIELSKSQVFLKKEFYNGMPYYIITAYLIK HHHHHHCCCCEEECHHHHHHHHHHHCCCCHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA