Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is traN [H]

Identifier: 238028288

GI number: 238028288

Start: 3116134

End: 3116994

Strand: Direct

Name: traN [H]

Synonym: bglu_1g27450

Alternate gene names: 238028288

Gene position: 3116134-3116994 (Clockwise)

Preceding gene: 238028287

Following gene: 238028290

Centisome position: 79.77

GC content: 60.16

Gene sequence:

>861_bases
ATGCGTACACTCGGATTCCCCAGTAGCCTCGATGAACCCATCTTCCGTTGGCGCAACGATGCCGAGCTAAAGGCTCACCC
CGCGTATTCCGCAGCCAAAGCCGGCGACACTACTGCCGCGATTGACCTGATCCTTGATCTTGCGGATCCACTTTCGCAAC
AAGTTGGGAAAGTGCTGCATGCAAGAGGCTGGGCAGAACCGCTGATATTTGTTGCCCCTCACGCACGTGAAGCCCGAGGA
GACAATGCGATTCCCCAGGTGCTTGCTGTTTTTTTGAGCTTCGGCTTAGGCGAGGTCGACGAACGGATTGTGCAGACGAC
GAAGGTGTATCACACGGGTGCCGACGCCATGGAACGCCTCATCGCCCGGGCCAGCTTCCAAGGACCAGTACGGCGAGGCG
GAAACTACGTTCTGGTCGATGACGTCACCACATTGGGCGGCACGCTTTGCGATCTTTCCGACTACATCCGCCGAAGCGGC
GGGAACGTGGTCGCGGCCTGCGTCCTAGTGAATGCAAGCCGATCTGGTAAACTGTTCCCTGCACGAAAAATCGTGCGCCG
TCTAGAGGAGCAATACGGCCATGTCATCCGCCAAACGTTCCGCATCGAGCCAACTGCGCTCACGGCCGACGAGGCCCAGT
ACCTTATCGGCTTCCGTACCGCTGAGGAAATCCGAGGTCGCAGCGCTAAAGCAAGGGAAAAAACAGATCTCCGACTCCGC
TCGAAAGGCATTTTCCTCGATCGCAGCGGGGCATCCCCGCGCCAAGGGGCGGTAAAGCGGGCGCACCGCGTGCCCTTCCC
CGGCGCCAGCGCCCTGCGTACCGCGCGCTGGATCAAGCAACGCCGAGGAGCGGGGAAGTAG

Upstream 100 bases:

>100_bases
TCCGGCTGTTGCAACCCGTCGCCAATACTTCCGCTTGAAATCCAAACGCAGAGCATCACGATCGCCACTGCTAGGCAAGC
ACACTTCGAGCGGTACGCCG

Downstream 100 bases:

>100_bases
CCCCGCCTGTCACTGCCCACCCGCCATCTTCAACTGCCCTTTCTTGGCAACCTCATCCGGCCGCAGATTCGTGTACCGCT
TGAGGTTGCGCCAGTCTTTG

Product: conjugal transfer mating pair stabilization protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLHARGWAEPLIFVAPHAREARG
DNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERLIARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSG
GNVVAACVLVNASRSGKLFPARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR
SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK

Sequences:

>Translated_286_residues
MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLHARGWAEPLIFVAPHAREARG
DNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERLIARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSG
GNVVAACVLVNASRSGKLFPARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR
SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK
>Mature_286_residues
MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLHARGWAEPLIFVAPHAREARG
DNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERLIARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSG
GNVVAACVLVNASRSGKLFPARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR
SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK

Specific function: Unknown

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1407 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 31423; Mature: 31423

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLH
CCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARGWAEPLIFVAPHAREARGDNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERL
HCCCCCCEEEECCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
IARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSGGNVVAACVLVNASRSGKLFP
HHHHCCCCHHHHCCCEEEEECHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCH
ARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK
CCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLH
CCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARGWAEPLIFVAPHAREARGDNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERL
HCCCCCCEEEECCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
IARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSGGNVVAACVLVNASRSGKLFP
HHHHCCCCHHHHCCCEEEEECHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCH
ARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK
CCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA