| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is traN [H]
Identifier: 238028288
GI number: 238028288
Start: 3116134
End: 3116994
Strand: Direct
Name: traN [H]
Synonym: bglu_1g27450
Alternate gene names: 238028288
Gene position: 3116134-3116994 (Clockwise)
Preceding gene: 238028287
Following gene: 238028290
Centisome position: 79.77
GC content: 60.16
Gene sequence:
>861_bases ATGCGTACACTCGGATTCCCCAGTAGCCTCGATGAACCCATCTTCCGTTGGCGCAACGATGCCGAGCTAAAGGCTCACCC CGCGTATTCCGCAGCCAAAGCCGGCGACACTACTGCCGCGATTGACCTGATCCTTGATCTTGCGGATCCACTTTCGCAAC AAGTTGGGAAAGTGCTGCATGCAAGAGGCTGGGCAGAACCGCTGATATTTGTTGCCCCTCACGCACGTGAAGCCCGAGGA GACAATGCGATTCCCCAGGTGCTTGCTGTTTTTTTGAGCTTCGGCTTAGGCGAGGTCGACGAACGGATTGTGCAGACGAC GAAGGTGTATCACACGGGTGCCGACGCCATGGAACGCCTCATCGCCCGGGCCAGCTTCCAAGGACCAGTACGGCGAGGCG GAAACTACGTTCTGGTCGATGACGTCACCACATTGGGCGGCACGCTTTGCGATCTTTCCGACTACATCCGCCGAAGCGGC GGGAACGTGGTCGCGGCCTGCGTCCTAGTGAATGCAAGCCGATCTGGTAAACTGTTCCCTGCACGAAAAATCGTGCGCCG TCTAGAGGAGCAATACGGCCATGTCATCCGCCAAACGTTCCGCATCGAGCCAACTGCGCTCACGGCCGACGAGGCCCAGT ACCTTATCGGCTTCCGTACCGCTGAGGAAATCCGAGGTCGCAGCGCTAAAGCAAGGGAAAAAACAGATCTCCGACTCCGC TCGAAAGGCATTTTCCTCGATCGCAGCGGGGCATCCCCGCGCCAAGGGGCGGTAAAGCGGGCGCACCGCGTGCCCTTCCC CGGCGCCAGCGCCCTGCGTACCGCGCGCTGGATCAAGCAACGCCGAGGAGCGGGGAAGTAG
Upstream 100 bases:
>100_bases TCCGGCTGTTGCAACCCGTCGCCAATACTTCCGCTTGAAATCCAAACGCAGAGCATCACGATCGCCACTGCTAGGCAAGC ACACTTCGAGCGGTACGCCG
Downstream 100 bases:
>100_bases CCCCGCCTGTCACTGCCCACCCGCCATCTTCAACTGCCCTTTCTTGGCAACCTCATCCGGCCGCAGATTCGTGTACCGCT TGAGGTTGCGCCAGTCTTTG
Product: conjugal transfer mating pair stabilization protein TraN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLHARGWAEPLIFVAPHAREARG DNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERLIARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSG GNVVAACVLVNASRSGKLFPARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK
Sequences:
>Translated_286_residues MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLHARGWAEPLIFVAPHAREARG DNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERLIARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSG GNVVAACVLVNASRSGKLFPARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK >Mature_286_residues MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLHARGWAEPLIFVAPHAREARG DNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERLIARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSG GNVVAACVLVNASRSGKLFPARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK
Specific function: Unknown
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1407 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 31423; Mature: 31423
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLH CCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ARGWAEPLIFVAPHAREARGDNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERL HCCCCCCEEEECCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH IARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSGGNVVAACVLVNASRSGKLFP HHHHCCCCHHHHCCCEEEEECHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCH ARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR HHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK CCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRTLGFPSSLDEPIFRWRNDAELKAHPAYSAAKAGDTTAAIDLILDLADPLSQQVGKVLH CCCCCCCCCCCHHHHHCCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ARGWAEPLIFVAPHAREARGDNAIPQVLAVFLSFGLGEVDERIVQTTKVYHTGADAMERL HCCCCCCEEEECCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH IARASFQGPVRRGGNYVLVDDVTTLGGTLCDLSDYIRRSGGNVVAACVLVNASRSGKLFP HHHHCCCCHHHHCCCEEEEECHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCH ARKIVRRLEEQYGHVIRQTFRIEPTALTADEAQYLIGFRTAEEIRGRSAKAREKTDLRLR HHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH SKGIFLDRSGASPRQGAVKRAHRVPFPGASALRTARWIKQRRGAGK CCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA