Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028282
Identifier: 238028282
GI number: 238028282
Start: 3110337
End: 3110909
Strand: Reverse
Name: 238028282
Synonym: bglu_1g27390
Alternate gene names: NA
Gene position: 3110909-3110337 (Counterclockwise)
Preceding gene: 238028289
Following gene: 238028281
Centisome position: 79.63
GC content: 62.83
Gene sequence:
>573_bases ATGAAAGCGCCGCAATCTCAAAACTTCGATATGACCTGCCGATACGACAGTACCGAATGGCTGGACGTGCTCTACACGTC CGTGCGCAATACGCCGGGTGGCGTCGCCGACGCCGCGAACCACCTCACGAATCGACGGGGAAAGAACATCACGCCCGAGT CGCTGCGCCTTCGCCTGCGTGGCGTCGGCGACAGCCGGCTCTCGATGGAGATGTTCGAGCTGCTGGTCGAGTGGATGCAG GAAAAAGCCGAGGCGAGCGCGCATGCGCTCGACGCCTTGCACGCATTGAATGCACGGTTCGGTTTGGTCGCTGAGTCAGT CGACGAGCAGGGCGTGGACGACGCGGGCGAGGGCAGTGCGATGCGGCTGGTATCGACTGCCCTGAGCCTGCAAGCGCACG TCGGGCTTGTTGCGGACGATGTTACGCGCGCCCTTGTCGATCGTCGTATCGACGACAACGATGCGGAGAAGATCATCGCG ACGGGACGGAAGGGACAGCGTCTCTTTCAACGCCTGATTCACGCGGCCCGCAACCTCGCAGCCCGACGTCGGCGCCGCCA TGGATCGAATTGA
Upstream 100 bases:
>100_bases GTTGCCGCCGAATCTTCCATGTCCGAGCGAGTTTCCCCGTCCGCAGTTGACCCTGCTGCGATGTGCTGAATCGTAAGCCG TCGCCTTCTGCCGTAACAGC
Downstream 100 bases:
>100_bases ACCGGGTATGGGCTGCTGCCGCATAGCGCGGGAGCATGTCGGCCTGTCCTGCGATCGAGGGCAGCAACTCGCGTGTGGAC GAGCCGCGCTGGCCTGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKAPQSQNFDMTCRYDSTEWLDVLYTSVRNTPGGVADAANHLTNRRGKNITPESLRLRLRGVGDSRLSMEMFELLVEWMQ EKAEASAHALDALHALNARFGLVAESVDEQGVDDAGEGSAMRLVSTALSLQAHVGLVADDVTRALVDRRIDDNDAEKIIA TGRKGQRLFQRLIHAARNLAARRRRRHGSN
Sequences:
>Translated_190_residues MKAPQSQNFDMTCRYDSTEWLDVLYTSVRNTPGGVADAANHLTNRRGKNITPESLRLRLRGVGDSRLSMEMFELLVEWMQ EKAEASAHALDALHALNARFGLVAESVDEQGVDDAGEGSAMRLVSTALSLQAHVGLVADDVTRALVDRRIDDNDAEKIIA TGRKGQRLFQRLIHAARNLAARRRRRHGSN >Mature_190_residues MKAPQSQNFDMTCRYDSTEWLDVLYTSVRNTPGGVADAANHLTNRRGKNITPESLRLRLRGVGDSRLSMEMFELLVEWMQ EKAEASAHALDALHALNARFGLVAESVDEQGVDDAGEGSAMRLVSTALSLQAHVGLVADDVTRALVDRRIDDNDAEKIIA TGRKGQRLFQRLIHAARNLAARRRRRHGSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21091; Mature: 21091
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPQSQNFDMTCRYDSTEWLDVLYTSVRNTPGGVADAANHLTNRRGKNITPESLRLRLR CCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH GVGDSRLSMEMFELLVEWMQEKAEASAHALDALHALNARFGLVAESVDEQGVDDAGEGSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH MRLVSTALSLQAHVGLVADDVTRALVDRRIDDNDAEKIIATGRKGQRLFQRLIHAARNLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH ARRRRRHGSN HHHHHHCCCC >Mature Secondary Structure MKAPQSQNFDMTCRYDSTEWLDVLYTSVRNTPGGVADAANHLTNRRGKNITPESLRLRLR CCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH GVGDSRLSMEMFELLVEWMQEKAEASAHALDALHALNARFGLVAESVDEQGVDDAGEGSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH MRLVSTALSLQAHVGLVADDVTRALVDRRIDDNDAEKIIATGRKGQRLFQRLIHAARNLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH ARRRRRHGSN HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA