Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028281
Identifier: 238028281
GI number: 238028281
Start: 3109967
End: 3110350
Strand: Reverse
Name: 238028281
Synonym: bglu_1g27380
Alternate gene names: NA
Gene position: 3110350-3109967 (Counterclockwise)
Preceding gene: 238028282
Following gene: 238028280
Centisome position: 79.62
GC content: 66.15
Gene sequence:
>384_bases ATGGATCGAATTGAACCGGGTATGGGCTGCTGCCGCATAGCGCGGGAGCATGTCGGCCTGTCCTGCGATCGAGGGCAGCA ACTCGCGTGTGGACGAGCCGCGCTGGCCTGTCGCCTCGACAGGGCGCCCGAGGATGCGGGGCGGCTGTTCAAGTCGCTGA TGTCGACGTTCCCCGATCGCCTCGCGATGTTTGCCGACGAGGCAATCCAGGCCGGCCGCGTCGATGCTTTTGTGCGCGTC GCTGCTCGCGTGTGCGCCGCGCTTCCCACCAAAGCGGAACGCCATTCGTTCCGTGATCAGTTCGCCGGGTGCATACCGGC GGATGACCTGTCCGCGTTCGATACCCAGATGGCCGCCGAGTGGCGCCGCCTGCGCGGCAAATAA
Upstream 100 bases:
>100_bases GATGCGGAGAAGATCATCGCGACGGGACGGAAGGGACAGCGTCTCTTTCAACGCCTGATTCACGCGGCCCGCAACCTCGC AGCCCGACGTCGGCGCCGCC
Downstream 100 bases:
>100_bases CCGGAGACCAAAGTGACTTTAGAGCGTGTGAGCCGCGCATTGCGTCGGCGGCACTCGGTGCCGCTGCGTAAATCGATCGG CGTGAATGTCTATGCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDRIEPGMGCCRIAREHVGLSCDRGQQLACGRAALACRLDRAPEDAGRLFKSLMSTFPDRLAMFADEAIQAGRVDAFVRV AARVCAALPTKAERHSFRDQFAGCIPADDLSAFDTQMAAEWRRLRGK
Sequences:
>Translated_127_residues MDRIEPGMGCCRIAREHVGLSCDRGQQLACGRAALACRLDRAPEDAGRLFKSLMSTFPDRLAMFADEAIQAGRVDAFVRV AARVCAALPTKAERHSFRDQFAGCIPADDLSAFDTQMAAEWRRLRGK >Mature_127_residues MDRIEPGMGCCRIAREHVGLSCDRGQQLACGRAALACRLDRAPEDAGRLFKSLMSTFPDRLAMFADEAIQAGRVDAFVRV AARVCAALPTKAERHSFRDQFAGCIPADDLSAFDTQMAAEWRRLRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13989; Mature: 13989
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIEPGMGCCRIAREHVGLSCDRGQQLACGRAALACRLDRAPEDAGRLFKSLMSTFPDR CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LAMFADEAIQAGRVDAFVRVAARVCAALPTKAERHSFRDQFAGCIPADDLSAFDTQMAAE HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH WRRLRGK HHHHCCC >Mature Secondary Structure MDRIEPGMGCCRIAREHVGLSCDRGQQLACGRAALACRLDRAPEDAGRLFKSLMSTFPDR CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LAMFADEAIQAGRVDAFVRVAARVCAALPTKAERHSFRDQFAGCIPADDLSAFDTQMAAE HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH WRRLRGK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA