Click here to switch to the map view.

The map label for this gene is ydaV [C]

Identifier: 238028244

GI number: 238028244

Start: 3077107

End: 3077904

Strand: Direct

Name: ydaV [C]

Synonym: bglu_1g26980

Alternate gene names: 238028244

Gene position: 3077107-3077904 (Clockwise)

Preceding gene: 238028243

Following gene: 238028245

Centisome position: 78.77

GC content: 60.9

Gene sequence:

>798_bases
ATGTCTAACGACATCGCCGCCCAGCTCAAGGGGCTCAAACTGCATGGCATGGCGAGCACGTGGCCGGAGCTGCTGGCGCA
GTCGCGTCACACGGAGTTCAACCCGGAGCGCTTCATGAAGCAGCTGCTGATGGCTGAAACCGCCGAACGGCAGGTGCGCT
CGATCGCCTACCAGATGACCGCCGCTCGCTTCCCGGCACACCGCGACCTGAAGGGCTTCGACTTCGCGCAGGCACACGTC
GACGAAGCGCTGGTGCGCGAACTGAGCGAGCTGTCGTTCCTCGCAAGCGCGCACAACGTCGTGTTCATCGGTGGTCCGGG
CACCGGCAAGACGCACCTCGCCTCAGCGATCGGAATCGAAGCCGTACAGCGCCACGGCAAGCGCGTGCGCTACTTCTCGA
CTGTCGAGCTGACCAACGCCTTGGAGCAGGAGAAGTCCATCGGAAAACAAGGCCAGATCGCCCACAAGCTGATGTACGTC
GACCTGGTGATCCTCGACGAACTGGGCTATCTGCCGTTCAGCCAGACCGGCGGTGCATTGCTGTTCCATCTGCTCTCAAA
GCTATACGAGCACACGAGCGTCGCGATCACGACCAATCTCAGCTTCGGCGAGTGGGCGAGCGTGTTCGGGGACGCAAAGA
TGACGACGGCGCTGCTGGACCGCGTCACCCATCACTGCCACATCGTCGAAACGGGCAATGAATCGTGGCGCTTCAGGACC
AGTTCTGCCAAGGCAAAGACAACAAGAAAAAGAGCGGCAAAACCAGCGGGTAACGAAGAGTTATCCACACCGGAATAG

Upstream 100 bases:

>100_bases
AGCACCAACCTCGCGACGACGAAACTCCAGCTTACCGAAGAGCCGGCCGCCGACGTGAGCCGCTACGAAACCCTGCGTGC
CAACCCACCGGAGGACCGTC

Downstream 100 bases:

>100_bases
ATGTACTACGCTGTCTCGGGGTGGGTCAGATTTAGATGAAATCGGTGGGTTAAGACTCGGTGGAAATCAACACATATGGG
CCGAGCCATGATCTGCGTCG

Product: IstB-like ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSNDIAAQLKGLKLHGMASTWPELLAQSRHTEFNPERFMKQLLMAETAERQVRSIAYQMTAARFPAHRDLKGFDFAQAHV
DEALVRELSELSFLASAHNVVFIGGPGTGKTHLASAIGIEAVQRHGKRVRYFSTVELTNALEQEKSIGKQGQIAHKLMYV
DLVILDELGYLPFSQTGGALLFHLLSKLYEHTSVAITTNLSFGEWASVFGDAKMTTALLDRVTHHCHIVETGNESWRFRT
SSAKAKTTRKRAAKPAGNEELSTPE

Sequences:

>Translated_265_residues
MSNDIAAQLKGLKLHGMASTWPELLAQSRHTEFNPERFMKQLLMAETAERQVRSIAYQMTAARFPAHRDLKGFDFAQAHV
DEALVRELSELSFLASAHNVVFIGGPGTGKTHLASAIGIEAVQRHGKRVRYFSTVELTNALEQEKSIGKQGQIAHKLMYV
DLVILDELGYLPFSQTGGALLFHLLSKLYEHTSVAITTNLSFGEWASVFGDAKMTTALLDRVTHHCHIVETGNESWRFRT
SSAKAKTTRKRAAKPAGNEELSTPE
>Mature_264_residues
SNDIAAQLKGLKLHGMASTWPELLAQSRHTEFNPERFMKQLLMAETAERQVRSIAYQMTAARFPAHRDLKGFDFAQAHVD
EALVRELSELSFLASAHNVVFIGGPGTGKTHLASAIGIEAVQRHGKRVRYFSTVELTNALEQEKSIGKQGQIAHKLMYVD
LVILDELGYLPFSQTGGALLFHLLSKLYEHTSVAITTNLSFGEWASVFGDAKMTTALLDRVTHHCHIVETGNESWRFRTS
SAKAKTTRKRAAKPAGNEELSTPE

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 29404; Mature: 29273

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDIAAQLKGLKLHGMASTWPELLAQSRHTEFNPERFMKQLLMAETAERQVRSIAYQMT
CCCCHHHHHCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AARFPAHRDLKGFDFAQAHVDEALVRELSELSFLASAHNVVFIGGPGTGKTHLASAIGIE
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
AVQRHGKRVRYFSTVELTNALEQEKSIGKQGQIAHKLMYVDLVILDELGYLPFSQTGGAL
HHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LFHLLSKLYEHTSVAITTNLSFGEWASVFGDAKMTTALLDRVTHHCHIVETGNESWRFRT
HHHHHHHHHHCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCEEEEC
SSAKAKTTRKRAAKPAGNEELSTPE
CCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SNDIAAQLKGLKLHGMASTWPELLAQSRHTEFNPERFMKQLLMAETAERQVRSIAYQMT
CCCHHHHHCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AARFPAHRDLKGFDFAQAHVDEALVRELSELSFLASAHNVVFIGGPGTGKTHLASAIGIE
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
AVQRHGKRVRYFSTVELTNALEQEKSIGKQGQIAHKLMYVDLVILDELGYLPFSQTGGAL
HHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LFHLLSKLYEHTSVAITTNLSFGEWASVFGDAKMTTALLDRVTHHCHIVETGNESWRFRT
HHHHHHHHHHCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCCEEEEC
SSAKAKTTRKRAAKPAGNEELSTPE
CCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]