Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is phnB [H]
Identifier: 238028225
GI number: 238028225
Start: 3049576
End: 3050013
Strand: Direct
Name: phnB [H]
Synonym: bglu_1g26780
Alternate gene names: 238028225
Gene position: 3049576-3050013 (Clockwise)
Preceding gene: 238028224
Following gene: 238028231
Centisome position: 78.06
GC content: 69.86
Gene sequence:
>438_bases ATGCAAGTCCAACCGTATCTGTTCTTCGGCGGACGCTGTGACGAGGCGATCGCGTTCTATCGCGACACGCTCGGCGCGCA GTTGCAATTGCTGATGCGCTACCGCGACGCGCCGCCGGGCCCCGACATGCCGGTCGATGCGGCTGCGGCCGACAAGGTGA TGCACGCGAGCCTGCGCATCGGCGAATCGACGCTGATGTGCTCGGACGGCGACCTCCGGCAGGCGGCGCCGCAGGTTCAC GACGGCTATTCGCTGTCGCTGAATCCCGCCACGCTCGACGAGGGCCGCCGCCGGTTCGACGCGCTCGCGGCCGGCGGCAC GGTCGTGATGCCGTTCGGCCCGACCTTCTGGGCGCTCGGCTTCGGCATGCTGCGCGACCGCTTCGGCGTGCACTGGATGA TCAACGTCGAGGACCCGGCCGCGCGGCCCGTCGCCTGA
Upstream 100 bases:
>100_bases TTCACGTCCGCGCCGGCTCCGGCGCACTACAATCGACGATACCGCGCATGCCGCGGCCCGTCCCGGCAAGTGCGACGGAT GATGCCCCCAGGAGGCGACC
Downstream 100 bases:
>100_bases CGAGAGACGGGCCGCGGCAGCCTCGTCGCGGCCCGTGCTGCGCCTCGGGCGCGACCTTCCCGCGCCCGCCGCACGGCGCC CGAACGGCTCGTCCGGCGCA
Product: VOC metalloenzyme family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MQVQPYLFFGGRCDEAIAFYRDTLGAQLQLLMRYRDAPPGPDMPVDAAAADKVMHASLRIGESTLMCSDGDLRQAAPQVH DGYSLSLNPATLDEGRRRFDALAAGGTVVMPFGPTFWALGFGMLRDRFGVHWMINVEDPAARPVA
Sequences:
>Translated_145_residues MQVQPYLFFGGRCDEAIAFYRDTLGAQLQLLMRYRDAPPGPDMPVDAAAADKVMHASLRIGESTLMCSDGDLRQAAPQVH DGYSLSLNPATLDEGRRRFDALAAGGTVVMPFGPTFWALGFGMLRDRFGVHWMINVEDPAARPVA >Mature_145_residues MQVQPYLFFGGRCDEAIAFYRDTLGAQLQLLMRYRDAPPGPDMPVDAAAADKVMHASLRIGESTLMCSDGDLRQAAPQVH DGYSLSLNPATLDEGRRRFDALAAGGTVVMPFGPTFWALGFGMLRDRFGVHWMINVEDPAARPVA
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=147, Percent_Identity=39.4557823129252, Blast_Score=103, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15874; Mature: 15874
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVQPYLFFGGRCDEAIAFYRDTLGAQLQLLMRYRDAPPGPDMPVDAAAADKVMHASLRI CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEE GESTLMCSDGDLRQAAPQVHDGYSLSLNPATLDEGRRRFDALAAGGTVVMPFGPTFWALG CCEEEEECCCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHH FGMLRDRFGVHWMINVEDPAARPVA HHHHHHCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MQVQPYLFFGGRCDEAIAFYRDTLGAQLQLLMRYRDAPPGPDMPVDAAAADKVMHASLRI CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEE GESTLMCSDGDLRQAAPQVHDGYSLSLNPATLDEGRRRFDALAAGGTVVMPFGPTFWALG CCEEEEECCCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHH FGMLRDRFGVHWMINVEDPAARPVA HHHHHHCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]