Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028218

Identifier: 238028218

GI number: 238028218

Start: 3042674

End: 3043042

Strand: Reverse

Name: 238028218

Synonym: bglu_1g26710

Alternate gene names: NA

Gene position: 3043042-3042674 (Counterclockwise)

Preceding gene: 339905974

Following gene: 238028214

Centisome position: 77.9

GC content: 66.12

Gene sequence:

>369_bases
ATGAACACGCTTCAACCGGCATTCCGCACCGCGGCGGCGCTCGCGCTGGCCGCCTGTTTCGCGGTGGGCACCGCGCACGC
GGCCGACGCGGCCAAGGGCAAGCAGCTCGTCGAGTCGCACAACTGCGCCGCCTGCCACGGCGCCACCTTCGACAACCCGA
TCAACGCCGAATATCCGCGCCTCGCGGGGCAGCGCGCCGACTACCTGGTCTGGGCCATGCGCCAGTATCAGATGGGACTC
GACAATCCGATGCTAGGCCGCAACAACGCGATCATGCGTGCGCAGGTGCAGAACCTGTCGGTCAGCGACATGAAGGACAT
CGCCGCCTATCTGGAGACGCTGCCGGGCAGCCTGGTGTTCAAGAAATGA

Upstream 100 bases:

>100_bases
GCGGACCTCGCCGCGTACTACGCGTCCCGCAAGCCCGATTCGAAGTCCAATCCCTACAAGTGACGCCTGCGCTGGCCTTC
TCAGCAGGACAGGAGCCCTC

Downstream 100 bases:

>100_bases
CGCGCCGGGCCGCCCGGCGGTGATCCGCGCGATGCCCCGCCTGGCGGGGCATTTTTTTGGGCGCCCGCCGCCTCGCTCGG
CCGGTTCCATGATCGCCTGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome; Cytochrome C Class IC; Cytochrome C Family Protein; Cytochrome C -Related Protein; Class I Cytochrome C; Cytochrome C-Type Protein; Cytochrome C; Periplasmic Cytochrome

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPRLAGQRADYLVWAMRQYQMGL
DNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVFKK

Sequences:

>Translated_122_residues
MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPRLAGQRADYLVWAMRQYQMGL
DNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVFKK
>Mature_122_residues
MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPRLAGQRADYLVWAMRQYQMGL
DNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVFKK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13156; Mature: 13156

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCH
LAGQRADYLVWAMRQYQMGLDNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVF
HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCEEE
KK
CC
>Mature Secondary Structure
MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCH
LAGQRADYLVWAMRQYQMGLDNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVF
HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCEEE
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA