| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028218
Identifier: 238028218
GI number: 238028218
Start: 3042674
End: 3043042
Strand: Reverse
Name: 238028218
Synonym: bglu_1g26710
Alternate gene names: NA
Gene position: 3043042-3042674 (Counterclockwise)
Preceding gene: 339905974
Following gene: 238028214
Centisome position: 77.9
GC content: 66.12
Gene sequence:
>369_bases ATGAACACGCTTCAACCGGCATTCCGCACCGCGGCGGCGCTCGCGCTGGCCGCCTGTTTCGCGGTGGGCACCGCGCACGC GGCCGACGCGGCCAAGGGCAAGCAGCTCGTCGAGTCGCACAACTGCGCCGCCTGCCACGGCGCCACCTTCGACAACCCGA TCAACGCCGAATATCCGCGCCTCGCGGGGCAGCGCGCCGACTACCTGGTCTGGGCCATGCGCCAGTATCAGATGGGACTC GACAATCCGATGCTAGGCCGCAACAACGCGATCATGCGTGCGCAGGTGCAGAACCTGTCGGTCAGCGACATGAAGGACAT CGCCGCCTATCTGGAGACGCTGCCGGGCAGCCTGGTGTTCAAGAAATGA
Upstream 100 bases:
>100_bases GCGGACCTCGCCGCGTACTACGCGTCCCGCAAGCCCGATTCGAAGTCCAATCCCTACAAGTGACGCCTGCGCTGGCCTTC TCAGCAGGACAGGAGCCCTC
Downstream 100 bases:
>100_bases CGCGCCGGGCCGCCCGGCGGTGATCCGCGCGATGCCCCGCCTGGCGGGGCATTTTTTTGGGCGCCCGCCGCCTCGCTCGG CCGGTTCCATGATCGCCTGC
Product: cytochrome c family protein
Products: NA
Alternate protein names: Cytochrome; Cytochrome C Class IC; Cytochrome C Family Protein; Cytochrome C -Related Protein; Class I Cytochrome C; Cytochrome C-Type Protein; Cytochrome C; Periplasmic Cytochrome
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPRLAGQRADYLVWAMRQYQMGL DNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVFKK
Sequences:
>Translated_122_residues MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPRLAGQRADYLVWAMRQYQMGL DNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVFKK >Mature_122_residues MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPRLAGQRADYLVWAMRQYQMGL DNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVFKK
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13156; Mature: 13156
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCH LAGQRADYLVWAMRQYQMGLDNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVF HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCEEE KK CC >Mature Secondary Structure MNTLQPAFRTAAALALAACFAVGTAHAADAAKGKQLVESHNCAACHGATFDNPINAEYPR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCH LAGQRADYLVWAMRQYQMGLDNPMLGRNNAIMRAQVQNLSVSDMKDIAAYLETLPGSLVF HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCCEEE KK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA