Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028196

Identifier: 238028196

GI number: 238028196

Start: 3011995

End: 3012408

Strand: Reverse

Name: 238028196

Synonym: bglu_1g26480

Alternate gene names: NA

Gene position: 3012408-3011995 (Counterclockwise)

Preceding gene: 238028197

Following gene: 238028181

Centisome position: 77.11

GC content: 74.64

Gene sequence:

>414_bases
ATGAAGACGTCTCGCTTGCTGCTCGCGTTGCTGCTGGCCGGTTCGCTCGGATCGCCGCTCGCCTTCGCGCAGCAGCCGCC
GCCTGGCGGCGACCACGGCCCCGGCCCGGGCGGTCCCGAGGGGCCGGGAGGGCCGGCTCATCACCATCCGCCGCGTCTCG
GCCATGGCGGCCCGGCCGGCCATCCGCCGGGCGGGCCGCGCGCCGAGCCGCCCGGCGGCTTCATCGAAGGCCATCGCGAC
TGGCGCCGCGGCGACCGGCTTCCGCGCGAATACTGGGACCGTCAATACGTCATCGACGACTGGCGCGACTACCATCTCGC
GCCGCCGCCGCGCGGCTACCACTGGGTCGGCGTCGGCGGCGACTATCTGCTGGTGCAGATCGGGAACGGCTTGGTGCTGC
GGGTCGGCCCGTGA

Upstream 100 bases:

>100_bases
CCGACGATGCGCGTCGCGATGGGCTCGCGGCGGTCCGCATGCTAGTCTCGTCGAGCCGGCCGCCGGATCGGCCGGCTAAT
CTGGATCTGGGGGAAAACAC

Downstream 100 bases:

>100_bases
GGCAGGGCGGCGGGCGGCGCCCGCCGGGGTCGCTGCCGGCCTGAACGCCGTCGCCGCCAAGCCGGTACGCCAAAGCCCTG
CCCGCGTCAGCGGGCGGGTT

Product: membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like; Integral Membrane Protein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAGHPPGGPRAEPPGGFIEGHRD
WRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGGDYLLVQIGNGLVLRVGP

Sequences:

>Translated_137_residues
MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAGHPPGGPRAEPPGGFIEGHRD
WRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGGDYLLVQIGNGLVLRVGP
>Mature_137_residues
MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAGHPPGGPRAEPPGGFIEGHRD
WRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGGDYLLVQIGNGLVLRVGP

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14602; Mature: 14602

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAG
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HPPGGPRAEPPGGFIEGHRDWRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGG
CCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCEEECCCCCCCCCCCCCCEEEEEECC
DYLLVQIGNGLVLRVGP
CEEEEEECCCEEEEECC
>Mature Secondary Structure
MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAG
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HPPGGPRAEPPGGFIEGHRDWRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGG
CCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCEEECCCCCCCCCCCCCCEEEEEECC
DYLLVQIGNGLVLRVGP
CEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA