| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028196
Identifier: 238028196
GI number: 238028196
Start: 3011995
End: 3012408
Strand: Reverse
Name: 238028196
Synonym: bglu_1g26480
Alternate gene names: NA
Gene position: 3012408-3011995 (Counterclockwise)
Preceding gene: 238028197
Following gene: 238028181
Centisome position: 77.11
GC content: 74.64
Gene sequence:
>414_bases ATGAAGACGTCTCGCTTGCTGCTCGCGTTGCTGCTGGCCGGTTCGCTCGGATCGCCGCTCGCCTTCGCGCAGCAGCCGCC GCCTGGCGGCGACCACGGCCCCGGCCCGGGCGGTCCCGAGGGGCCGGGAGGGCCGGCTCATCACCATCCGCCGCGTCTCG GCCATGGCGGCCCGGCCGGCCATCCGCCGGGCGGGCCGCGCGCCGAGCCGCCCGGCGGCTTCATCGAAGGCCATCGCGAC TGGCGCCGCGGCGACCGGCTTCCGCGCGAATACTGGGACCGTCAATACGTCATCGACGACTGGCGCGACTACCATCTCGC GCCGCCGCCGCGCGGCTACCACTGGGTCGGCGTCGGCGGCGACTATCTGCTGGTGCAGATCGGGAACGGCTTGGTGCTGC GGGTCGGCCCGTGA
Upstream 100 bases:
>100_bases CCGACGATGCGCGTCGCGATGGGCTCGCGGCGGTCCGCATGCTAGTCTCGTCGAGCCGGCCGCCGGATCGGCCGGCTAAT CTGGATCTGGGGGAAAACAC
Downstream 100 bases:
>100_bases GGCAGGGCGGCGGGCGGCGCCCGCCGGGGTCGCTGCCGGCCTGAACGCCGTCGCCGCCAAGCCGGTACGCCAAAGCCCTG CCCGCGTCAGCGGGCGGGTT
Product: membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like; Integral Membrane Protein
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAGHPPGGPRAEPPGGFIEGHRD WRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGGDYLLVQIGNGLVLRVGP
Sequences:
>Translated_137_residues MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAGHPPGGPRAEPPGGFIEGHRD WRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGGDYLLVQIGNGLVLRVGP >Mature_137_residues MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAGHPPGGPRAEPPGGFIEGHRD WRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGGDYLLVQIGNGLVLRVGP
Specific function: Unknown
COG id: COG5455
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14602; Mature: 14602
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAG CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPPGGPRAEPPGGFIEGHRDWRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGG CCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCEEECCCCCCCCCCCCCCEEEEEECC DYLLVQIGNGLVLRVGP CEEEEEECCCEEEEECC >Mature Secondary Structure MKTSRLLLALLLAGSLGSPLAFAQQPPPGGDHGPGPGGPEGPGGPAHHHPPRLGHGGPAG CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPPGGPRAEPPGGFIEGHRDWRRGDRLPREYWDRQYVIDDWRDYHLAPPPRGYHWVGVGG CCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCEEECCCCCCCCCCCCCCEEEEEECC DYLLVQIGNGLVLRVGP CEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA