BacMap

Definition	Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession	NC_012724
Length	3,906,507

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The map label for this gene is fabG [H]

Identifier: 238028181

GI number: 238028181

Start: 2998529

End: 2999308

Strand: Reverse

Name: fabG [H]

Synonym: bglu_1g26330

Alternate gene names: 238028181

Gene position: 2999308-2998529 (Counterclockwise)

Preceding gene: 238028196

Following gene: 238028180

Centisome position: 76.78

GC content: 72.69

Gene sequence:

>780_bases
ATGGATCTCGGCATCGCAGGACGGACCGCGCTCGTGTGCGCGGCCAGCAAGGGACTCGGACGCGGTTGCGCGCAGGCGCT
CGCGGCCGAGGGCGTGAAGCTCGTGATCGTCGCGCGCACGCAGGCGACGCTCGACGCCGCCGCGGCGCAGATCCGCCAGA
CCACCGGCGCCGAGGTGACGGCGGTGGCCTGCGACATCACCACGGCCGCCGGCCGCGAGGCGGCACTCGCCGCGTGCCCG
CAGCCCGACATCCTCGTGACCAACGCGGGCGGCCCGCCCCCCGGCGACTTCCGCGAGTTCTCGCGCGACGACTGGCTGCG
CGCGATCGACGCGAACATGCTCACGCCGATCGAGCTGATCCGCGCCACCGTGGACGGCATGATCGCGCGCCGCTTCGGGC
GCATCGTCAACATCACGAGTTCGGCCGTGAAGGCGCCGATCGACGTGCTGGCGCTGTCCAACGGCGCGCGCTCGGGGCTG
ACGGGCTTCATCGCCGGGCTTTCGCGCAAGGTGGCCGAGCACAACGTGACGATCAACAACCTGCTGCCGGGGCTGTTCGA
CACCGACCGCATCCAGACTACGCTGGCCGCCTCGGCGAAGGCGGCCGGCAAGCCGGTCGACGAGATGCGCGCGCGCCGCA
CGCAGGAAATTCCGGCGCGCCGGCTCGGCCGGCCCGACGAGTTCGGCGCGGCCTGCGCGTTTCTCTGCAGCGCGCACGCC
GGCTACATCACCGGCCAGAACTGGCTGCTCGACGGCGGCGCCTACCCCGGCACGTTCTGA

Upstream 100 bases:

>100_bases
TGCGCGGGCGCGGCCTGGGCCGGCCGGATCGGCCTTGCCCGTGCGGCGCGCCGCGTTTCGGTGCGGCCTGGCCGCCCGCT
CACCGCAAGGACAGACTCGA

Downstream 100 bases:

>100_bases
TCCAGCCGGCCCGGGCCACGCGTCCGGGCCACTGGCACGGCTGCCCGCCCGCTGCGAGGGCGGGCGCGTTTCCGGGGCGG
CGGCCAGCGCCGCGCGGCTC

Product: short chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDLGIAGRTALVCAASKGLGRGCAQALAAEGVKLVIVARTQATLDAAAAQIRQTTGAEVTAVACDITTAAGREAALAACP
QPDILVTNAGGPPPGDFREFSRDDWLRAIDANMLTPIELIRATVDGMIARRFGRIVNITSSAVKAPIDVLALSNGARSGL
TGFIAGLSRKVAEHNVTINNLLPGLFDTDRIQTTLAASAKAAGKPVDEMRARRTQEIPARRLGRPDEFGAACAFLCSAHA
GYITGQNWLLDGGAYPGTF

Sequences:

>Translated_259_residues
MDLGIAGRTALVCAASKGLGRGCAQALAAEGVKLVIVARTQATLDAAAAQIRQTTGAEVTAVACDITTAAGREAALAACP
QPDILVTNAGGPPPGDFREFSRDDWLRAIDANMLTPIELIRATVDGMIARRFGRIVNITSSAVKAPIDVLALSNGARSGL
TGFIAGLSRKVAEHNVTINNLLPGLFDTDRIQTTLAASAKAAGKPVDEMRARRTQEIPARRLGRPDEFGAACAFLCSAHA
GYITGQNWLLDGGAYPGTF
>Mature_259_residues
MDLGIAGRTALVCAASKGLGRGCAQALAAEGVKLVIVARTQATLDAAAAQIRQTTGAEVTAVACDITTAAGREAALAACP
QPDILVTNAGGPPPGDFREFSRDDWLRAIDANMLTPIELIRATVDGMIARRFGRIVNITSSAVKAPIDVLALSNGARSGL
TGFIAGLSRKVAEHNVTINNLLPGLFDTDRIQTTLAASAKAAGKPVDEMRARRTQEIPARRLGRPDEFGAACAFLCSAHA
GYITGQNWLLDGGAYPGTF

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=31.1023622047244, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=27.8225806451613, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI7705925, Length=256, Percent_Identity=29.296875, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=26.8482490272374, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI226371731, Length=184, Percent_Identity=28.804347826087, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=26.0700389105058, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=26.1044176706827, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI15277342, Length=265, Percent_Identity=28.3018867924528, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=29.1208791208791, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=28.2722513089005, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787335, Length=264, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=28.6821705426357, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=31.5384615384615, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=25.0980392156863, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=26.171875, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789208, Length=260, Percent_Identity=29.2307692307692, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=25.6916996047431, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=27.0588235294118, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=30.3149606299213, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=27.734375, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=28.740157480315, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=25.6704980842912, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=27.3764258555133, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=25.9398496240602, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=26.5873015873016, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=27.1375464684015, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=27.7992277992278, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=25.1908396946565, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=271, Percent_Identity=25.4612546125461, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=25.6603773584906, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=261, Percent_Identity=24.1379310344828, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=26.5625, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=25.2873563218391, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=24.907063197026, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=25.9109311740891, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=258, Percent_Identity=24.031007751938, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=271, Percent_Identity=26.1992619926199, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=23.6641221374046, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=26.3779527559055, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24639444, Length=263, Percent_Identity=26.2357414448669, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI23397609, Length=256, Percent_Identity=27.34375, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24584744, Length=191, Percent_Identity=30.3664921465969, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28574402, Length=191, Percent_Identity=30.3664921465969, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=29.6296296296296, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=29.6296296296296, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=28.90625, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24640442, Length=199, Percent_Identity=28.1407035175879, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=29.1828793774319, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=25.2873563218391, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26897; Mature: 26897

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGIAGRTALVCAASKGLGRGCAQALAAEGVKLVIVARTQATLDAAAAQIRQTTGAEVT
CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCEEE
AVACDITTAAGREAALAACPQPDILVTNAGGPPPGDFREFSRDDWLRAIDANMLTPIELI
EEEEECCHHCCCCHHHHCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCHHHHH
RATVDGMIARRFGRIVNITSSAVKAPIDVLALSNGARSGLTGFIAGLSRKVAEHNVTINN
HHHHHHHHHHHHHHHEEECHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH
LLPGLFDTDRIQTTLAASAKAAGKPVDEMRARRTQEIPARRLGRPDEFGAACAFLCSAHA
HCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCC
GYITGQNWLLDGGAYPGTF
CEEECCCEEEECCCCCCCC
>Mature Secondary Structure
MDLGIAGRTALVCAASKGLGRGCAQALAAEGVKLVIVARTQATLDAAAAQIRQTTGAEVT
CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCEEE
AVACDITTAAGREAALAACPQPDILVTNAGGPPPGDFREFSRDDWLRAIDANMLTPIELI
EEEEECCHHCCCCHHHHCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHCCCCCHHHHH
RATVDGMIARRFGRIVNITSSAVKAPIDVLALSNGARSGLTGFIAGLSRKVAEHNVTINN
HHHHHHHHHHHHHHHEEECHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHH
LLPGLFDTDRIQTTLAASAKAAGKPVDEMRARRTQEIPARRLGRPDEFGAACAFLCSAHA
HCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCC
GYITGQNWLLDGGAYPGTF
CEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]