Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_012724 |
Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028191
Identifier: 238028191
GI number: 238028191
Start: 3007807
End: 3008109
Strand: Direct
Name: 238028191
Synonym: bglu_1g26430
Alternate gene names: NA
Gene position: 3007807-3008109 (Clockwise)
Preceding gene: 238028190
Following gene: 238028192
Centisome position: 76.99
GC content: 69.97
Gene sequence:
>303_bases ATGCCGGCAGCAACCGAGGTCCCGATCCAGCTCGATCCGATCCCCTGCGAGGGCTACGAGATCCACGTCACCGTCCAGCC CGCGCGCGCCGTCGCGAACCGCTACACCTACGTCGCCTATCTCTGCCGCCCCGGCGCCAGCGCCGGCCTGCCCGGCCAGA CGGTGCCGTTCCATCCGAACGGCGAGGAAAGCTTCGCCTCGGTAGACGAAGCCGCAAGCGACGCAAAGCGCATCGGCGCC ATGATCGTCGAGGGCTCGCATCCCAGCCTGTCGGTGCAGTCGCTCGCCGGACCGGGCGCCTGA
Upstream 100 bases:
>100_bases CGCGCCCGCCGCCCCGCCTCACCTACAATACAGGCCGAAGCACACGCCCACCGCCCCGGCGCGCGACCCGCGCGCCGTCC GCGGCGACACGGAGGCCATC
Downstream 100 bases:
>100_bases CACGGCCTGATACCGCCCGAATGGCACGCCCCGGCACCGCGCCGCCGCCCGGCTCGACCTGCTGCCGCGGCCCGTCGAGC TGGACGGCTTCGGGTTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPAATEVPIQLDPIPCEGYEIHVTVQPARAVANRYTYVAYLCRPGASAGLPGQTVPFHPNGEESFASVDEAASDAKRIGA MIVEGSHPSLSVQSLAGPGA
Sequences:
>Translated_100_residues MPAATEVPIQLDPIPCEGYEIHVTVQPARAVANRYTYVAYLCRPGASAGLPGQTVPFHPNGEESFASVDEAASDAKRIGA MIVEGSHPSLSVQSLAGPGA >Mature_99_residues PAATEVPIQLDPIPCEGYEIHVTVQPARAVANRYTYVAYLCRPGASAGLPGQTVPFHPNGEESFASVDEAASDAKRIGAM IVEGSHPSLSVQSLAGPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10361; Mature: 10230
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAATEVPIQLDPIPCEGYEIHVTVQPARAVANRYTYVAYLCRPGASAGLPGQTVPFHPN CCCCCCCCEEECCCCCCCEEEEEEECCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC GEESFASVDEAASDAKRIGAMIVEGSHPSLSVQSLAGPGA CCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCC >Mature Secondary Structure PAATEVPIQLDPIPCEGYEIHVTVQPARAVANRYTYVAYLCRPGASAGLPGQTVPFHPN CCCCCCCEEECCCCCCCEEEEEEECCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC GEESFASVDEAASDAKRIGAMIVEGSHPSLSVQSLAGPGA CCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA