| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028161
Identifier: 238028161
GI number: 238028161
Start: 2975508
End: 2976023
Strand: Direct
Name: 238028161
Synonym: bglu_1g26120
Alternate gene names: NA
Gene position: 2975508-2976023 (Clockwise)
Preceding gene: 238028160
Following gene: 238028162
Centisome position: 76.17
GC content: 73.06
Gene sequence:
>516_bases GTGAGCGCCGCGCCGGCTGCCTCCACGCCTGCCGGGTCCGGTGCGCCGCCGAGCGTGCGACGCCGGCTCGCCGCCCTCCT GTACGAAGCCGTGCTGCTGTTCGGCGTGGTGTTCTTCGCCGGCCTCGCGTTCGCGCTGACGCTCGGCCAGCGCAACGGCC TTGTTCATCACCAATGGCTCGCCGCCTGGATCGCGCTGGTGGTCGGTGCCTATTTCGTCTGGTTCTGGACTCACGGCGGG CAGACCCTGCCGATGAAAACCTGGCGGTTGCGCGTGGTCACCGCCGCCGGCGCGCCGCTCTCGGCCGGTCGCGCGCTGTG GCGCTATTTGCTCGCCTGGCTCTGGTTCGTGCCGCCGCTCGCGCTGCATCCGCTCTTCGCACTGAGCGTGCCGGCGACGC TCGTCGCGAGCGCCGCCTGGATCGTGCTGTGGGCGCTCGCCGCGCGGCTCGACCGCGGCCGGCGGTTTCCGCACGACCGG CTGGCCGGCACGCGCATCGAAGCCGTGCCGCGCTGA
Upstream 100 bases:
>100_bases CCAGCGCGGTGCCGCCGACCACGGCCGCCTCCGGCACGCTCGCGCCGCCGGCCGAGCGCCCGGTCTGGCCGGCCGACACG CAGTCGATCTACCAGGGATC
Downstream 100 bases:
>100_bases CGCGCGCGATACCCTTCGCGCGTCCCGCGCCTCGCCGGACGGCCGCGCCGCACGGCGAGCCGCCCCGCAGCCGGACCGTG TGGCAGCCCGCTCCCAGCCG
Product: RDD domain-containing protein
Products: NA
Alternate protein names: RDD Domain Containing Protein; RDD Family Protein; Transmembrane Protein; RDD Domain Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSAAPAASTPAGSGAPPSVRRRLAALLYEAVLLFGVVFFAGLAFALTLGQRNGLVHHQWLAAWIALVVGAYFVWFWTHGG QTLPMKTWRLRVVTAAGAPLSAGRALWRYLLAWLWFVPPLALHPLFALSVPATLVASAAWIVLWALAARLDRGRRFPHDR LAGTRIEAVPR
Sequences:
>Translated_171_residues MSAAPAASTPAGSGAPPSVRRRLAALLYEAVLLFGVVFFAGLAFALTLGQRNGLVHHQWLAAWIALVVGAYFVWFWTHGG QTLPMKTWRLRVVTAAGAPLSAGRALWRYLLAWLWFVPPLALHPLFALSVPATLVASAAWIVLWALAARLDRGRRFPHDR LAGTRIEAVPR >Mature_170_residues SAAPAASTPAGSGAPPSVRRRLAALLYEAVLLFGVVFFAGLAFALTLGQRNGLVHHQWLAAWIALVVGAYFVWFWTHGGQ TLPMKTWRLRVVTAAGAPLSAGRALWRYLLAWLWFVPPLALHPLFALSVPATLVASAAWIVLWALAARLDRGRRFPHDRL AGTRIEAVPR
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18653; Mature: 18522
Theoretical pI: Translated: 12.45; Mature: 12.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAPAASTPAGSGAPPSVRRRLAALLYEAVLLFGVVFFAGLAFALTLGQRNGLVHHQWL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AAWIALVVGAYFVWFWTHGGQTLPMKTWRLRVVTAAGAPLSAGRALWRYLLAWLWFVPPL HHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHH ALHPLFALSVPATLVASAAWIVLWALAARLDRGRRFPHDRLAGTRIEAVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure SAAPAASTPAGSGAPPSVRRRLAALLYEAVLLFGVVFFAGLAFALTLGQRNGLVHHQWL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AAWIALVVGAYFVWFWTHGGQTLPMKTWRLRVVTAAGAPLSAGRALWRYLLAWLWFVPPL HHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHH ALHPLFALSVPATLVASAAWIVLWALAARLDRGRRFPHDRLAGTRIEAVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA