| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028160
Identifier: 238028160
GI number: 238028160
Start: 2974738
End: 2975511
Strand: Direct
Name: 238028160
Synonym: bglu_1g26110
Alternate gene names: NA
Gene position: 2974738-2975511 (Clockwise)
Preceding gene: 238028159
Following gene: 238028161
Centisome position: 76.15
GC content: 73.0
Gene sequence:
>774_bases ATGCAGAAACGGGGATTGGCGATATTTTTCGGGAGCGTGATCGCGCTCGCGATCGCTTACGCGGCCACCTACCCGCGTTT CGAGGAATCGCCCCCGGCCGCCGCCCCGGTCGCGGCACCCACCTCGGCGCCCGCCGGCGTCAGCGCGCCGCAAGCCGCGC AGCCGGCCGGCGGCCTGTCGCTGCCGGGCGGCTTCGCCGGCCTGCCGGCCGACGGCCCGCTGTCGTGGGCGCGCCTGACG CCGCCCCAGCGCGTGGCGCTGGCGCCGTTCGAGCACCTGTGGGACGGCTTCAGCGAAGCGCGCCGGCGCAAATGGCTGAA GATCGCGGCACGTTTCCCGAAAATGTCGGCCGACGAGCAGAAGCGGCTCCATGAGCGCATGACGCAATGGGCCGAGATGA CGCCCGAGCAACGGCGCGTCGCGCGCGAGAACTACCAGGTCTCGAAGGACCTGACCGCGCAGGCGCGTGAGCGCGCCTGG AAGGACTATCAGAAGCTGTCGCCGGAACAGAAGGCAAGACTCGCGGCCGCCGAGCGGCACCGGCGCCCGACCGTCGTCAG CGCGCCGCCGTCCGGCAAGAGCGACCGCGACATCAATCGGCTCGTGAATGCGCACGACCGCACGGCAGTCCCGGCGCTCG TGCCGCTCGCACCACCCGCCTCCGGTGCCGCCAGCGCGGTGCCGCCGACCACGGCCGCCTCCGGCACGCTCGCGCCGCCG GCCGAGCGCCCGGTCTGGCCGGCCGACACGCAGTCGATCTACCAGGGATCGTGA
Upstream 100 bases:
>100_bases TGAGCGATAACCTGCCGCTCAACGCCTACCTCGACCACGGCTTCAACGCCTACCTGTCACACACGCGCTGAGCGCGACCA CGGAAAGGACCCACGGGGCG
Downstream 100 bases:
>100_bases GCGCCGCGCCGGCTGCCTCCACGCCTGCCGGGTCCGGTGCGCCGCCGAGCGTGCGACGCCGGCTCGCCGCCCTCCTGTAC GAAGCCGTGCTGCTGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MQKRGLAIFFGSVIALAIAYAATYPRFEESPPAAAPVAAPTSAPAGVSAPQAAQPAGGLSLPGGFAGLPADGPLSWARLT PPQRVALAPFEHLWDGFSEARRRKWLKIAARFPKMSADEQKRLHERMTQWAEMTPEQRRVARENYQVSKDLTAQARERAW KDYQKLSPEQKARLAAAERHRRPTVVSAPPSGKSDRDINRLVNAHDRTAVPALVPLAPPASGAASAVPPTTAASGTLAPP AERPVWPADTQSIYQGS
Sequences:
>Translated_257_residues MQKRGLAIFFGSVIALAIAYAATYPRFEESPPAAAPVAAPTSAPAGVSAPQAAQPAGGLSLPGGFAGLPADGPLSWARLT PPQRVALAPFEHLWDGFSEARRRKWLKIAARFPKMSADEQKRLHERMTQWAEMTPEQRRVARENYQVSKDLTAQARERAW KDYQKLSPEQKARLAAAERHRRPTVVSAPPSGKSDRDINRLVNAHDRTAVPALVPLAPPASGAASAVPPTTAASGTLAPP AERPVWPADTQSIYQGS >Mature_257_residues MQKRGLAIFFGSVIALAIAYAATYPRFEESPPAAAPVAAPTSAPAGVSAPQAAQPAGGLSLPGGFAGLPADGPLSWARLT PPQRVALAPFEHLWDGFSEARRRKWLKIAARFPKMSADEQKRLHERMTQWAEMTPEQRRVARENYQVSKDLTAQARERAW KDYQKLSPEQKARLAAAERHRRPTVVSAPPSGKSDRDINRLVNAHDRTAVPALVPLAPPASGAASAVPPTTAASGTLAPP AERPVWPADTQSIYQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27632; Mature: 27632
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRGLAIFFGSVIALAIAYAATYPRFEESPPAAAPVAAPTSAPAGVSAPQAAQPAGGLS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGGFAGLPADGPLSWARLTPPQRVALAPFEHLWDGFSEARRRKWLKIAARFPKMSADEQ CCCCCCCCCCCCCCCHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KRLHERMTQWAEMTPEQRRVARENYQVSKDLTAQARERAWKDYQKLSPEQKARLAAAERH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RRPTVVSAPPSGKSDRDINRLVNAHDRTAVPALVPLAPPASGAASAVPPTTAASGTLAPP CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC AERPVWPADTQSIYQGS CCCCCCCCCCCHHHCCC >Mature Secondary Structure MQKRGLAIFFGSVIALAIAYAATYPRFEESPPAAAPVAAPTSAPAGVSAPQAAQPAGGLS CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGGFAGLPADGPLSWARLTPPQRVALAPFEHLWDGFSEARRRKWLKIAARFPKMSADEQ CCCCCCCCCCCCCCCHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH KRLHERMTQWAEMTPEQRRVARENYQVSKDLTAQARERAWKDYQKLSPEQKARLAAAERH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RRPTVVSAPPSGKSDRDINRLVNAHDRTAVPALVPLAPPASGAASAVPPTTAASGTLAPP CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC AERPVWPADTQSIYQGS CCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA