| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is relA [H]
Identifier: 238027732
GI number: 238027732
Start: 2341367
End: 2343595
Strand: Reverse
Name: relA [H]
Synonym: bglu_1g21530
Alternate gene names: 238027732
Gene position: 2343595-2341367 (Counterclockwise)
Preceding gene: 238027733
Following gene: 238027731
Centisome position: 59.99
GC content: 68.6
Gene sequence:
>2229_bases ATGAACGTCGATTCCGCCGCTCACGCGTCGCCCGCGTTCGACGAGGTGCTTGCCTATGTCCGCGAGCATGCCGGTGACGC GCTGCAGCCGTCGGGCGAGCGGCTCGCCGATCACGCGGCCGGCATCGTCGCGATCATGCGCACGCTCAACGTCGATCCGC AGGCGGTGCAGGCCGCCGCGCTGTTCTCGCTCACGCCGCATCTGCACGATCCCGAAGCCGAGATCACGCAGCGCTTCGGC GCGGAGGTCGCGAGGCTGGTGGCCGACACCCGCAAGCTGCTGAAGCTCGGCACCGTCAGCCTGATCGCGGCGCGCCAGGC GAGCGACGGCAGCCGTGACGCACAGGCCGAACGGCGCGCGCAGATCGAGGCGCTGCGCAAGATGCTGCTCGCGTTCGCGC AGGACATCCGCGTGGTGATGATCCGGCTCGCCTCGCGGTTGCAGTCGCTGCGCTACTATGCGGCCGCCAAGCTGCAGCCG CCGCCCGACGTGGCGCGCGAGACGCTCGATATCTACGCGCCGCTCGCGAACCGGCTCGGCATCTGGCAACTGAAGTGGGA ACTCGAGGATCTCGCGTTCCGCTTCGAGGACCCGGTCACCTACAAGCGTATCGCCAAGCTGCTCGACGAGAAGCGCGCCG AGCGCGAAGCCTACGTCACGCATGCGATCGAGCGGCTCGAGCGGGAGCTGGCCGCCGCACAGATCCCGGCCGAGGTCAGC GGCCGGCCGAAACACATCTACAGCATCTGGCGCAAGATGCGCGGCAAGGAGCTCGATTTTTCCGAGCTCTACGACGTGCG GGCATTTCGCGTGATCGTGCCCGACATCAAGGATTGCTATGCGGTGCTCGGCATCGTGCATCATCTCTGGCAGCCGGTGC CGCGCGAGTTCGACGACTACATCTCGCGGCCCAAGCCGAACGGCTATAAGTCGCTGCACACCGTCGTGATCGGCGACGAC GGCCGCGCGTTCGAGGTGCAGATCCGCACCCAGGAGATGCACCGCTTCGCCGAATACGGCGTGGCCGCGCACTGGCGCTA CAAGGAGGCCGGCGCGCGCGGCTACGGCGGGCAGTTCTCGGCCGGCGACAAGTACGACGACAAGATCGCCTGGCTGCGGC AGTTGCTGGCGTGGAAGGACGAGGTGTCCGATGGTGCGGCCGCCGAGGCCGGCAACGAGGCCTGGGCGCAACTGCGCGAG ACCTCGCTCGACGACGACCACATCTATGTGCTGACCCCGCATGGGCGCGTGATCGCGCTGCCGCACGGCGCAACGCCCGT CGATTTTGCCTACCACCTGCACAGCGAGCTGGGGCATCGCTGCCGCGGCGCGCGCGTGGATGGCGCGATGGTGCCGCTCA ATACGGCGCTCACCAACGGCCAGACGGTCGAGATCGTCGCCGTGAAGGAGGGCGGCCCGTCGCGCGACTGGCTCAACCCG CAGTTGGGCTACCTGCAAAGCGGCCGCGCGCGCCAGAAGGTGCGTGCCTGGTTCAACCTGATCGACCAGCAGGAAATCAT CACGCGCGGGCGCGCGCTCGTCGAAAAGACGCTGCAGCGCGAGGGCAAGACCTCGGTCAACCTCGAAAGCCTCGCCGCGA AGCTCGGCTTCAAGGCGCCGGAGGAACTGTTCGCCGCGGTCGGCAAGGAAGAGTTCAGCCTGCGCCATATCGAGCAGGCG TTGTCCGACGCGCCGCCGCCCGAGCCCGAAGCGGAGGCGCCGGAGCAGTTCGAGAAGCGCAGCAGCGGCGCGAGCGTCGC GCACGGCGCCTCCACGGGTGTGCTGGTGGTTGGCGTCGACGCGCTGCTCACGCAACTCGCGCGCTGCTGCCGGCCGGCAC CGCCCGATCCGATCAGCGGCTTCGTCACGCGCGGCAAGGGCATGTCGATCCATCGCAGCGACTGCCCGATGTTCCAGCGC ATGGCCGAGCGCGCTCCCGAACGCGTGCTGCAGACGACCTGGTCGGCCGACGTGCTGGGCGGCCGCGGCGCATCGGTTTA TCCGGTCGACCTGATCATCGACGCGAGCGACCGGCAAGGGCTGCTGCGCGACATTTCCGAGGTGTTCGCGCGCGAGAAGA TGAACGTGACCGGCGTGAAGACGCAGAGCCGCCGCAATGCCGCCGTCATGCAGTTCACGGTCGAGGTATCGAATTCGGCA CAGGTGCAGCGCGCCTGCACGCTGCTCGGCGAGGTGGCCGGCGTGGTGCGCGCCACGCGCAAGAGCTGA
Upstream 100 bases:
>100_bases AACCCGGCCTGCCTCGTCGAAGTGGTGGTGGTGGCCGCGCAGAAGGCCTGAGCGCGCCGATTCGAGCCGATAACGCGCTG ATCCCGATTCCGAGCCGCCA
Downstream 100 bases:
>100_bases GCACGCCGCCGCCCGGTGCCGGGCCGCGGCTTCGCGCTGCACAAATTGCTTGTCACGGCGGAAAAAGGTCCATATAATCT CGTTTCTTCAGGCTCGTAGC
Product: GTP diphosphokinase
Products: NA
Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MNVDSAAHASPAFDEVLAYVREHAGDALQPSGERLADHAAGIVAIMRTLNVDPQAVQAAALFSLTPHLHDPEAEITQRFG AEVARLVADTRKLLKLGTVSLIAARQASDGSRDAQAERRAQIEALRKMLLAFAQDIRVVMIRLASRLQSLRYYAAAKLQP PPDVARETLDIYAPLANRLGIWQLKWELEDLAFRFEDPVTYKRIAKLLDEKRAEREAYVTHAIERLERELAAAQIPAEVS GRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPREFDDYISRPKPNGYKSLHTVVIGDD GRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGARGYGGQFSAGDKYDDKIAWLRQLLAWKDEVSDGAAAEAGNEAWAQLRE TSLDDDHIYVLTPHGRVIALPHGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTALTNGQTVEIVAVKEGGPSRDWLNP QLGYLQSGRARQKVRAWFNLIDQQEIITRGRALVEKTLQREGKTSVNLESLAAKLGFKAPEELFAAVGKEEFSLRHIEQA LSDAPPPEPEAEAPEQFEKRSSGASVAHGASTGVLVVGVDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCPMFQR MAERAPERVLQTTWSADVLGGRGASVYPVDLIIDASDRQGLLRDISEVFAREKMNVTGVKTQSRRNAAVMQFTVEVSNSA QVQRACTLLGEVAGVVRATRKS
Sequences:
>Translated_742_residues MNVDSAAHASPAFDEVLAYVREHAGDALQPSGERLADHAAGIVAIMRTLNVDPQAVQAAALFSLTPHLHDPEAEITQRFG AEVARLVADTRKLLKLGTVSLIAARQASDGSRDAQAERRAQIEALRKMLLAFAQDIRVVMIRLASRLQSLRYYAAAKLQP PPDVARETLDIYAPLANRLGIWQLKWELEDLAFRFEDPVTYKRIAKLLDEKRAEREAYVTHAIERLERELAAAQIPAEVS GRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPREFDDYISRPKPNGYKSLHTVVIGDD GRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGARGYGGQFSAGDKYDDKIAWLRQLLAWKDEVSDGAAAEAGNEAWAQLRE TSLDDDHIYVLTPHGRVIALPHGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTALTNGQTVEIVAVKEGGPSRDWLNP QLGYLQSGRARQKVRAWFNLIDQQEIITRGRALVEKTLQREGKTSVNLESLAAKLGFKAPEELFAAVGKEEFSLRHIEQA LSDAPPPEPEAEAPEQFEKRSSGASVAHGASTGVLVVGVDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCPMFQR MAERAPERVLQTTWSADVLGGRGASVYPVDLIIDASDRQGLLRDISEVFAREKMNVTGVKTQSRRNAAVMQFTVEVSNSA QVQRACTLLGEVAGVVRATRKS >Mature_742_residues MNVDSAAHASPAFDEVLAYVREHAGDALQPSGERLADHAAGIVAIMRTLNVDPQAVQAAALFSLTPHLHDPEAEITQRFG AEVARLVADTRKLLKLGTVSLIAARQASDGSRDAQAERRAQIEALRKMLLAFAQDIRVVMIRLASRLQSLRYYAAAKLQP PPDVARETLDIYAPLANRLGIWQLKWELEDLAFRFEDPVTYKRIAKLLDEKRAEREAYVTHAIERLERELAAAQIPAEVS GRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPREFDDYISRPKPNGYKSLHTVVIGDD GRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGARGYGGQFSAGDKYDDKIAWLRQLLAWKDEVSDGAAAEAGNEAWAQLRE TSLDDDHIYVLTPHGRVIALPHGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTALTNGQTVEIVAVKEGGPSRDWLNP QLGYLQSGRARQKVRAWFNLIDQQEIITRGRALVEKTLQREGKTSVNLESLAAKLGFKAPEELFAAVGKEEFSLRHIEQA LSDAPPPEPEAEAPEQFEKRSSGASVAHGASTGVLVVGVDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCPMFQR MAERAPERVLQTTWSADVLGGRGASVYPVDLIIDASDRQGLLRDISEVFAREKMNVTGVKTQSRRNAAVMQFTVEVSNSA QVQRACTLLGEVAGVVRATRKS
Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1789147, Length=719, Percent_Identity=40.7510431154381, Blast_Score=538, Evalue=1e-154, Organism=Escherichia coli, GI1790082, Length=727, Percent_Identity=33.4250343878955, Blast_Score=377, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR012675 - InterPro: IPR007685 - InterPro: IPR004811 - InterPro: IPR004095 - InterPro: IPR012676 [H]
Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]
EC number: =2.7.6.5 [H]
Molecular weight: Translated: 82271; Mature: 82271
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVDSAAHASPAFDEVLAYVREHAGDALQPSGERLADHAAGIVAIMRTLNVDPQAVQAAA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LFSLTPHLHDPEAEITQRFGAEVARLVADTRKLLKLGTVSLIAARQASDGSRDAQAERRA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QIEALRKMLLAFAQDIRVVMIRLASRLQSLRYYAAAKLQPPPDVARETLDIYAPLANRLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC IWQLKWELEDLAFRFEDPVTYKRIAKLLDEKRAEREAYVTHAIERLERELAAAQIPAEVS EEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC GRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPREFDDY CCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCHHHHHH ISRPKPNGYKSLHTVVIGDDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGARGYGGQFS HCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHEEEEHHCCCCCCCCCCC AGDKYDDKIAWLRQLLAWKDEVSDGAAAEAGNEAWAQLRETSLDDDHIYVLTPHGRVIAL CCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEE PHGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTALTNGQTVEIVAVKEGGPSRDWLNP CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCEEEEEEEECCCCCCCCCCC QLGYLQSGRARQKVRAWFNLIDQQEIITRGRALVEKTLQREGKTSVNLESLAAKLGFKAP CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCH EELFAAVGKEEFSLRHIEQALSDAPPPEPEAEAPEQFEKRSSGASVAHGASTGVLVVGVD HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCEEEEEHH ALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCPMFQRMAERAPERVLQTTWSADVLG HHHHHHHHHCCCCCCCCCCHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC GRGASVYPVDLIIDASDRQGLLRDISEVFAREKMNVTGVKTQSRRNAAVMQFTVEVSNSA CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCH QVQRACTLLGEVAGVVRATRKS HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVDSAAHASPAFDEVLAYVREHAGDALQPSGERLADHAAGIVAIMRTLNVDPQAVQAAA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LFSLTPHLHDPEAEITQRFGAEVARLVADTRKLLKLGTVSLIAARQASDGSRDAQAERRA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QIEALRKMLLAFAQDIRVVMIRLASRLQSLRYYAAAKLQPPPDVARETLDIYAPLANRLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC IWQLKWELEDLAFRFEDPVTYKRIAKLLDEKRAEREAYVTHAIERLERELAAAQIPAEVS EEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC GRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPREFDDY CCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCHHHHHH ISRPKPNGYKSLHTVVIGDDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGARGYGGQFS HCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHEEEEHHCCCCCCCCCCC AGDKYDDKIAWLRQLLAWKDEVSDGAAAEAGNEAWAQLRETSLDDDHIYVLTPHGRVIAL CCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEE PHGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTALTNGQTVEIVAVKEGGPSRDWLNP CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCEEEEEEEECCCCCCCCCCC QLGYLQSGRARQKVRAWFNLIDQQEIITRGRALVEKTLQREGKTSVNLESLAAKLGFKAP CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCH EELFAAVGKEEFSLRHIEQALSDAPPPEPEAEAPEQFEKRSSGASVAHGASTGVLVVGVD HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCEEEEEHH ALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCPMFQRMAERAPERVLQTTWSADVLG HHHHHHHHHCCCCCCCCCCHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC GRGASVYPVDLIIDASDRQGLLRDISEVFAREKMNVTGVKTQSRRNAAVMQFTVEVSNSA CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCH QVQRACTLLGEVAGVVRATRKS HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7928955 [H]