| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is thrS [H]
Identifier: 238027731
GI number: 238027731
Start: 2339050
End: 2340957
Strand: Reverse
Name: thrS [H]
Synonym: bglu_1g21520
Alternate gene names: 238027731
Gene position: 2340957-2339050 (Counterclockwise)
Preceding gene: 238027732
Following gene: 238027730
Centisome position: 59.92
GC content: 63.52
Gene sequence:
>1908_bases ATGGTTTCGATACGCCTGCCCGACGGCTCAGTTCGACAGTACGAGCATCCGGTGACCGTCGCCGAAGTGGCCGCTTCGAT CGGCCCCGGTCTCGCCAAGGCCGCGCTCGGCGGCAAGCTCGACGGCGAACTCGTCGACACGTCCGCGCTGATCGATCACG ACGCGTCGCTTGCGATCGTGACCGACAAGGATGCCGACGGCCTCGACATCATTCGCCACTCGGCGGCGCACCTGCTTGCC TATGCGGTCAAGGATCTGTATCCGGAGGCGCAGGTGACGATCGGGCCGGTGATCGACAACGGCTTCTACTACGACTTCTC GTACAGCCGCCCGTTTACGCCGGAAGACCTCGCCAAGATCGAGAAGCGCATGCAGGAGCTCGCGAAGAAGGACGAGCCGG TGTCGCGGCGCGTCGTCTCGCGCGCCGAGGCGGTGGACTATTTCCGCGGCATCGGCGAGAAGTACAAGGCCGAGATCATC GAATCGATCCCGTCGAGCGACGAGATCAAGCTCTACTCGCACGGCGGCTTCACCGACCTGTGCCGCGGCCCGCACGTGCC GTCCACCGGCAAGCTGAAGGTGTTCAAGCTGATGAAGGTGGCCGGCGCTTACTGGCGCGGCGATTCGAAGAACGAGCAGT TGCAGCGCATCTACGGCACCGCCTGGACCAGGAAGGAAGACCAGGACGCCTATCTGCACATGCTGGAAGAGGCGGAGAAG CGCGATCACCGCAAGCTCGCCAAGCAGCTCGACCTGTTCCACATGCAGGAGGAATCGCCGGGCATGGTGTTCTGGCACCC GAAGGGCTGGGCGCTTTGGCAGCAGGTCGAGCAGTATATGCGCCGCCGCGTCAACGAGGCCGGCTATCTCGAGATCAAGA CGCCGATGATCATGGACCGCTCGCTCTGGGAGGCGTCGGGCCACTGGCAGAACTATCGCGAGAACATGTTTACCACCGAG TCGGAGAAGCGCGACTACGCGATCAAGCCGATGAATTGCCCGGGCCACGTGCAGGTCTTCAATCATGGCCTGCGCTCGTA CCGCGACCTGCCGCTGCGCTACGCCGAATTCGGCTCGTGCCATCGCAACGAGGCTTCGGGCGCGCTGCACGGCCTGATGC GCGTGCGCGGCTTCGTGCAGGACGACGCGCACATCTTCTGCACCGAGGACCAGTTCATCGCCGAGTCGATCGCGTTCAAT GAACTGGCGATGAGCGTCTACAAGGATTTTGGGTTCGATCAGATCTCGATCAAGCTGTCGCTGCGCCCGGACCAGCGCGC CGGCACCGACGAAACCTGGGATCGCGCGGAGCAGGGGCTGCGCGACGCGCTGACCGCGTGCGGACTCGCGTGGGAGGAAC TGCCGGGTGAAGGCGCGTTCTACGGCCCCAAGATCGAGTACCACATCAAGGATGCGCTCGGCCGTTCCTGGCAGTGCGGC ACGCTGCAACTCGACATGGTGCTGCCGGAGCGCCTCGGCGCCGAGTACGTGGCCGAGGACAACGGCCGCCGCCGGCCGGT CATGCTGCACCGCGCGATCGTCGGCTCGATGGAGCGTTTTCTTGGCATCCTGATCGAGCACCACGCCGGCGCGATGCCCG CCTGGCTCGCTCCGGTGCAGGCTATCGTCATGAATATTGCGGAAAACCAGGCCGATTACGCGGGGTCTTTGGCCCAATCG TTGCAAAAACAAGGGCTTAGGGTGGAGGCCGATTTGCGCAACGAGAAGATTAGCTATAAAATACGCGAACATGCGCTCGA GAAAGTCCCGTACCTGCTGGTCGTCGGTGACAAGGAGCGTGAAGCACAAACGGTAGCCGTGCGTGCCCGTGGCGGCGTCG AGCTTGGCGTAATGCCGGTCGAAGCCTTCGTTGAGCACCTGCAGCAGGATCTGCGGGCGTTCAAGTAA
Upstream 100 bases:
>100_bases TGCTTCAGAATGCGGCCCCTCGAAAGCGGGGCCGCATTTTTTTTGGTCGTTTTCAACGCATTGCCTGCCGCGTCCAGTCG GCATCACGGAGAGTGCCCTT
Downstream 100 bases:
>100_bases CCGCCCCGGCAGCGCGGCTCGTTTTTTTAATTTTTAGAGGAAACGTAACATCGCTACTGATAAGTCGTCGCATCGCATCA ACGGTGAAATCAACGCGCCG
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIVTDKDADGLDIIRHSAAHLLA YAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKIEKRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEII ESIPSSDEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK RDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTE SEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFN ELAMSVYKDFGFDQISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGEGAFYGPKIEYHIKDALGRSWQCG TLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPVQAIVMNIAENQADYAGSLAQS LQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKEREAQTVAVRARGGVELGVMPVEAFVEHLQQDLRAFK
Sequences:
>Translated_635_residues MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIVTDKDADGLDIIRHSAAHLLA YAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKIEKRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEII ESIPSSDEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK RDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTE SEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFN ELAMSVYKDFGFDQISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGEGAFYGPKIEYHIKDALGRSWQCG TLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPVQAIVMNIAENQADYAGSLAQS LQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKEREAQTVAVRARGGVELGVMPVEAFVEHLQQDLRAFK >Mature_635_residues MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIVTDKDADGLDIIRHSAAHLLA YAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKIEKRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEII ESIPSSDEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK RDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTE SEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFN ELAMSVYKDFGFDQISIKLSLRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGEGAFYGPKIEYHIKDALGRSWQCG TLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPVQAIVMNIAENQADYAGSLAQS LQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKEREAQTVAVRARGGVELGVMPVEAFVEHLQQDLRAFK
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38570111, Length=633, Percent_Identity=39.0205371248025, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI38202255, Length=638, Percent_Identity=38.0877742946708, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI20070344, Length=636, Percent_Identity=37.1069182389937, Blast_Score=399, Evalue=1e-111, Organism=Escherichia coli, GI1788013, Length=634, Percent_Identity=58.8328075709779, Blast_Score=789, Evalue=0.0, Organism=Escherichia coli, GI1786392, Length=137, Percent_Identity=27.7372262773723, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71984184, Length=633, Percent_Identity=38.3886255924171, Blast_Score=470, Evalue=1e-133, Organism=Caenorhabditis elegans, GI71984192, Length=633, Percent_Identity=38.3886255924171, Blast_Score=470, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6322112, Length=654, Percent_Identity=38.0733944954128, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6322654, Length=397, Percent_Identity=39.5465994962217, Blast_Score=304, Evalue=2e-83, Organism=Drosophila melanogaster, GI24583842, Length=631, Percent_Identity=39.1442155309033, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI28574141, Length=631, Percent_Identity=39.1442155309033, Blast_Score=476, Evalue=1e-134, Organism=Drosophila melanogaster, GI24583839, Length=631, Percent_Identity=39.1442155309033, Blast_Score=476, Evalue=1e-134,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 71869; Mature: 71869
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIV CEEEECCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEECHHHHHCCCCCEEEE TDKDADGLDIIRHSAAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKI ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHH EKRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEIIESIPSSDEIKLYSHGGFTDL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCHHH CRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR HHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCH SLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSC HHHHCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC HRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNELAMSVYKDFGFDQISIKLS CCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE LRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGEGAFYGPKIEYHIKDALGRSWQCG ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCEEEEEEHHHCCCCCCCC TLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPVQ CEEEEEECHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AIVMNIAENQADYAGSLAQSLQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKER HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCC EAQTVAVRARGGVELGVMPVEAFVEHLQQDLRAFK CCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSALIDHDASLAIV CEEEECCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEECHHHHHCCCCCEEEE TDKDADGLDIIRHSAAHLLAYAVKDLYPEAQVTIGPVIDNGFYYDFSYSRPFTPEDLAKI ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHH EKRMQELAKKDEPVSRRVVSRAEAVDYFRGIGEKYKAEIIESIPSSDEIKLYSHGGFTDL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCHHH CRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTRKEDQDAYLHMLEEAEK HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RDHRKLAKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR HHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCH SLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQVFNHGLRSYRDLPLRYAEFGSC HHHHCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC HRNEASGALHGLMRVRGFVQDDAHIFCTEDQFIAESIAFNELAMSVYKDFGFDQISIKLS CCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE LRPDQRAGTDETWDRAEQGLRDALTACGLAWEELPGEGAFYGPKIEYHIKDALGRSWQCG ECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCEEEEEEHHHCCCCCCCC TLQLDMVLPERLGAEYVAEDNGRRRPVMLHRAIVGSMERFLGILIEHHAGAMPAWLAPVQ CEEEEEECHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AIVMNIAENQADYAGSLAQSLQKQGLRVEADLRNEKISYKIREHALEKVPYLLVVGDKER HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCC EAQTVAVRARGGVELGVMPVEAFVEHLQQDLRAFK CCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA