| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027715
Identifier: 238027715
GI number: 238027715
Start: 2322277
End: 2323122
Strand: Reverse
Name: 238027715
Synonym: bglu_1g21360
Alternate gene names: NA
Gene position: 2323122-2322277 (Counterclockwise)
Preceding gene: 238027716
Following gene: 238027714
Centisome position: 59.47
GC content: 69.27
Gene sequence:
>846_bases ATGCCTGCCCCGACGCCGCCGCTCTACGAGGTCTACGCGCTTCGCATCGGCAGTAACGCGCAACGCACCGCGCGCGAAAA CTTCTTCTTCGACGCGTGCTGCGGGCCGCCCGACGCCTCGATGCCGCTCGACTACTTCTTCTGGGTGGTGCGCGACGCCA ACCGGACCGTGATCGTCGACACGGCGTTCCCGATCTCCACCGGCGTGCGCCGCGAGCGTCAGATGATGCGCTCGGTCGGC GAGGCGCTGGCCGGCCTCGACATCGATCCGTCCAGCGTGACCGACGTGATCATCACGCATCTGCACTGGGACCATGCCGG CAATCTGGACCTGTTCCCCAACGCGCGCGTCCACCTGCAGGGCGCCGAGCTGCGCTTCTGCACCGGCACCGAGATGCGCC ACCCGGCGCTGCGCAAGATCTACGATCGCGAGGACGTGCTGCAGGCCGTGGGCATCCTCTACGACGGCCGGCTCGTCGTG CATGAAGGCAACACCGAGTTCGCCCCCGGCATCGAGATGTGCCTGGTGGGCGGGCATACGCCCGGCAGCCAGGTGGTGCG CGTCGCGACGCGGCGCGGCCATGTCGTGCTGGCGGCCGACGCCGCCCACCTGTGGGCCAACGTGCGCGGCCGGCTCGCGT TCCCGATCCTGCACGACCTGGCGAAGGTACTCGACGCGTTCGAGACCATCGACGCGCTCGCCGACGGTCCCGACCACGTG ATTCCCGGCCACGATCCGCTCGTCGCGAGCGTGTTCCCGCACTTTCGCGGCGATCCGCACACCTTTTGCCTGCACGAGGA CCCGTTGCCGGGCAAGGCCGTGCGGGCAACACGCAAGGAGGGCTGA
Upstream 100 bases:
>100_bases AACTCGATTTCGAGTTCGCCGGCACCACGCGGATCGCCCATTGAGCGCCGCCCGCCAGCCCCCGAGGTCCATCATGCAAC CAGCTTCAGGGATTTCTCAG
Downstream 100 bases:
>100_bases GATGGCCGATATCGTGACCCGAGGGCAACTGTTCGATTATCAGCGGTATCGCGCGCATTTCACCGAGGTCGAGCCGGGTG CGGTGGCATGGTCGTGGGCT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Metal Dependent Hydrolase; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase; Metallo-Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase/Hydrolase; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Class B
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPAPTPPLYEVYALRIGSNAQRTARENFFFDACCGPPDASMPLDYFFWVVRDANRTVIVDTAFPISTGVRRERQMMRSVG EALAGLDIDPSSVTDVIITHLHWDHAGNLDLFPNARVHLQGAELRFCTGTEMRHPALRKIYDREDVLQAVGILYDGRLVV HEGNTEFAPGIEMCLVGGHTPGSQVVRVATRRGHVVLAADAAHLWANVRGRLAFPILHDLAKVLDAFETIDALADGPDHV IPGHDPLVASVFPHFRGDPHTFCLHEDPLPGKAVRATRKEG
Sequences:
>Translated_281_residues MPAPTPPLYEVYALRIGSNAQRTARENFFFDACCGPPDASMPLDYFFWVVRDANRTVIVDTAFPISTGVRRERQMMRSVG EALAGLDIDPSSVTDVIITHLHWDHAGNLDLFPNARVHLQGAELRFCTGTEMRHPALRKIYDREDVLQAVGILYDGRLVV HEGNTEFAPGIEMCLVGGHTPGSQVVRVATRRGHVVLAADAAHLWANVRGRLAFPILHDLAKVLDAFETIDALADGPDHV IPGHDPLVASVFPHFRGDPHTFCLHEDPLPGKAVRATRKEG >Mature_280_residues PAPTPPLYEVYALRIGSNAQRTARENFFFDACCGPPDASMPLDYFFWVVRDANRTVIVDTAFPISTGVRRERQMMRSVGE ALAGLDIDPSSVTDVIITHLHWDHAGNLDLFPNARVHLQGAELRFCTGTEMRHPALRKIYDREDVLQAVGILYDGRLVVH EGNTEFAPGIEMCLVGGHTPGSQVVRVATRRGHVVLAADAAHLWANVRGRLAFPILHDLAKVLDAFETIDALADGPDHVI PGHDPLVASVFPHFRGDPHTFCLHEDPLPGKAVRATRKEG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30973; Mature: 30841
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPTPPLYEVYALRIGSNAQRTARENFFFDACCGPPDASMPLDYFFWVVRDANRTVIVD CCCCCCCCEEEEEEEECCCHHHHHHHCCEEEECCCCCCCCCCHHEEEEEEECCCCEEEEE TAFPISTGVRRERQMMRSVGEALAGLDIDPSSVTDVIITHLHWDHAGNLDLFPNARVHLQ ECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCEECCCCCEEEEE GAELRFCTGTEMRHPALRKIYDREDVLQAVGILYDGRLVVHEGNTEFAPGIEMCLVGGHT CCEEEEECCCCCCCHHHHHHHCHHHHHHHHHHEECCEEEEECCCCCCCCCCEEEEECCCC PGSQVVRVATRRGHVVLAADAAHLWANVRGRLAFPILHDLAKVLDAFETIDALADGPDHV CHHHHHHEEECCCCEEEEECHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC IPGHDPLVASVFPHFRGDPHTFCLHEDPLPGKAVRATRKEG CCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCC >Mature Secondary Structure PAPTPPLYEVYALRIGSNAQRTARENFFFDACCGPPDASMPLDYFFWVVRDANRTVIVD CCCCCCCEEEEEEEECCCHHHHHHHCCEEEECCCCCCCCCCHHEEEEEEECCCCEEEEE TAFPISTGVRRERQMMRSVGEALAGLDIDPSSVTDVIITHLHWDHAGNLDLFPNARVHLQ ECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCEECCCCCEEEEE GAELRFCTGTEMRHPALRKIYDREDVLQAVGILYDGRLVVHEGNTEFAPGIEMCLVGGHT CCEEEEECCCCCCCHHHHHHHCHHHHHHHHHHEECCEEEEECCCCCCCCCCEEEEECCCC PGSQVVRVATRRGHVVLAADAAHLWANVRGRLAFPILHDLAKVLDAFETIDALADGPDHV CHHHHHHEEECCCCEEEEECHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCC IPGHDPLVASVFPHFRGDPHTFCLHEDPLPGKAVRATRKEG CCCCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA